Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.19□□□□□ -2.06
CDH12P55289 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.19□□□□□ -2.06
CDH12P55289 NDUFA5P6-201ENST00000542110 379 ntBASIC2.19□□□□□ -2.06
CDH12P55289 AC022441.3-201ENST00000605737 136 ntBASIC2.19□□□□□ -2.06
CDH12P55289 AC011373.1-201ENST00000607270 237 ntBASIC2.19□□□□□ -2.06
CDH12P55289 MIR6817-201ENST00000615588 66 ntBASIC2.19□□□□□ -2.06
CDH12P55289 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDH12P55289 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH12P55289 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNA5SP68-201ENST00000363885 119 ntBASIC2.18□□□□□ -2.06
CDH12P55289 SNORA67.1-201ENST00000364749 141 ntBASIC2.18□□□□□ -2.06
CDH12P55289 Y_RNA.332-201ENST00000365271 113 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNU6-418P-201ENST00000384035 107 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNU6-975P-201ENST00000384296 105 ntBASIC2.18□□□□□ -2.06
CDH12P55289 Y_RNA.541-201ENST00000384640 113 ntBASIC2.18□□□□□ -2.06
CDH12P55289 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
CDH12P55289 MIR483-201ENST00000385070 76 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNA5SP475-201ENST00000410568 110 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNU6-1203P-201ENST00000410703 110 ntBASIC2.18□□□□□ -2.06
CDH12P55289 Z92545.1-201ENST00000411782 234 ntBASIC2.18□□□□□ -2.06
CDH12P55289 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH12P55289 TOMM22P2-201ENST00000430735 237 ntBASIC2.18□□□□□ -2.06
CDH12P55289 AL137159.1-201ENST00000452808 512 ntBASIC2.18□□□□□ -2.06
CDH12P55289 PRELID3BP1-201ENST00000457142 540 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNU7-57P-201ENST00000459540 60 ntBASIC2.18□□□□□ -2.06
CDH12P55289 SNORA4.4-201ENST00000515921 135 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
CDH12P55289 RNU7-110P-201ENST00000516891 62 ntBASIC2.18□□□□□ -2.06
CDH12P55289 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH12P55289 MIR4658-201ENST00000584344 65 ntBASIC2.18□□□□□ -2.06
CDH12P55289 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
CDH12P55289 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDH12P55289 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.18□□□□□ -2.06
CDH12P55289 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDH12P55289 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
CDH12P55289 SNORD81.1-201ENST00000363064 77 ntBASIC2.17□□□□□ -2.06
CDH12P55289 SNORA72.2-201ENST00000365028 127 ntBASIC2.17□□□□□ -2.06
CDH12P55289 RNU6-1310P-201ENST00000384153 107 ntBASIC2.17□□□□□ -2.06
CDH12P55289 Y_RNA.446-201ENST00000384178 104 ntBASIC2.17□□□□□ -2.06
CDH12P55289 SNORA80E-201ENST00000384744 137 ntBASIC2.17□□□□□ -2.06
CDH12P55289 MIR1302-6-201ENST00000408466 90 ntBASIC2.17□□□□□ -2.06
CDH12P55289 MIR1185-2-201ENST00000408687 86 ntBASIC2.17□□□□□ -2.06
CDH12P55289 AC007064.1-201ENST00000412238 351 ntBASIC2.17□□□□□ -2.06
CDH12P55289 MTCO1P44-201ENST00000441935 243 ntBASIC2.17□□□□□ -2.06
CDH12P55289 AC010531.2-201ENST00000465012 153 ntBASIC2.17□□□□□ -2.06
CDH12P55289 TRBVB-201ENST00000477100 408 ntBASIC2.17□□□□□ -2.06
CDH12P55289 HMGB3P17-201ENST00000504195 649 ntBASIC2.17□□□□□ -2.06
CDH12P55289 AC026436.1-201ENST00000510537 270 ntBASIC2.17□□□□□ -2.06
CDH12P55289 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
CDH12P55289 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
CDH12P55289 RNU2-12P-201ENST00000517216 168 ntBASIC2.17□□□□□ -2.06
CDH12P55289 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.17□□□□□ -2.06
CDH12P55289 AP000942.4-201ENST00000604811 241 ntBASIC2.17□□□□□ -2.06
CDH12P55289 AP001282.2-201ENST00000616149 309 ntBASIC2.17□□□□□ -2.06
CDH12P55289 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH12P55289 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CDH12P55289 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH12P55289 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
CDH12P55289 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDH12P55289 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH12P55289 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH12P55289 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH12P55289 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CDH12P55289 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
CDH12P55289 Y_RNA.16-201ENST00000362421 102 ntBASIC2.16□□□□□ -2.06
CDH12P55289 RNU6-702P-201ENST00000364982 107 ntBASIC2.16□□□□□ -2.06
CDH12P55289 Y_RNA.331-201ENST00000365267 102 ntBASIC2.16□□□□□ -2.06
CDH12P55289 SNORD14D-201ENST00000384390 87 ntBASIC2.16□□□□□ -2.06
CDH12P55289 Y_RNA.556-201ENST00000384677 113 ntBASIC2.16□□□□□ -2.06
CDH12P55289 MIR1262-201ENST00000408276 93 ntBASIC2.16□□□□□ -2.06
CDH12P55289 RNU2-54P-201ENST00000410299 190 ntBASIC2.16□□□□□ -2.06
CDH12P55289 AC009963.1-201ENST00000417265 157 ntBASIC2.16□□□□□ -2.06
CDH12P55289 AC123900.1-201ENST00000420390 96 ntBASIC2.16□□□□□ -2.06
CDH12P55289 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH12P55289 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
CDH12P55289 AC114982.1-201ENST00000469402 321 ntBASIC2.16□□□□□ -2.06
CDH12P55289 SEPT14P8-201ENST00000508026 178 ntBASIC2.16□□□□□ -2.06
CDH12P55289 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
CDH12P55289 AC004817.2-201ENST00000561794 651 ntBASIC2.16□□□□□ -2.06
CDH12P55289 SNORD113-5-201ENST00000607261 78 ntBASIC2.16□□□□□ -2.06
CDH12P55289 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH12P55289 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
CDH12P55289 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH12P55289 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.16□□□□□ -2.06
CDH12P55289 snoZ196.1-201ENST00000625269 89 ntBASIC2.16□□□□□ -2.06
CDH12P55289 ZNF720P1-201ENST00000562403 1939 ntBASIC2.16□□□□□ -2.06
CDH12P55289 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH12P55289 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CDH12P55289 SNORA5B-201ENST00000363786 132 ntBASIC2.15□□□□□ -2.07
CDH12P55289 RNU1-148P-201ENST00000384472 162 ntBASIC2.15□□□□□ -2.07
CDH12P55289 Y_RNA.518-201ENST00000384552 113 ntBASIC2.15□□□□□ -2.07
CDH12P55289 RNU6-21P-201ENST00000384710 107 ntBASIC2.15□□□□□ -2.07
CDH12P55289 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDH12P55289 RNU6-57P-201ENST00000411348 103 ntBASIC2.15□□□□□ -2.07
CDH12P55289 SRIP3-201ENST00000413200 219 ntBASIC2.15□□□□□ -2.07
CDH12P55289 AL390729.2-201ENST00000416137 156 ntBASIC2.15□□□□□ -2.07
CDH12P55289 AC011753.1-201ENST00000451001 220 ntBASIC2.15□□□□□ -2.07
CDH12P55289 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH12P55289 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH12P55289 CYCSP26-201ENST00000534107 320 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms