Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL929325.1-201ENST00000603096 117 ntBASIC1.12□□□□□ -2.23
CDH4P55283 AC008873.1-201ENST00000625051 138 ntBASIC1.12□□□□□ -2.23
CDH4P55283 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CDH4P55283 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CDH4P55283 SNORD115-32-201ENST00000364079 82 ntBASIC1.11□□□□□ -2.23
CDH4P55283 Y_RNA.318-201ENST00000365131 97 ntBASIC1.11□□□□□ -2.23
CDH4P55283 Y_RNA.402-201ENST00000383972 102 ntBASIC1.11□□□□□ -2.23
CDH4P55283 MIR517A-201ENST00000385001 87 ntBASIC1.11□□□□□ -2.23
CDH4P55283 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CDH4P55283 RPL37P10-201ENST00000412884 288 ntBASIC1.11□□□□□ -2.23
CDH4P55283 AC016909.1-201ENST00000415916 166 ntBASIC1.11□□□□□ -2.23
CDH4P55283 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH4P55283 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH4P55283 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH4P55283 COX6CP14-201ENST00000469580 174 ntBASIC1.11□□□□□ -2.23
CDH4P55283 RNU6-720P-201ENST00000516363 108 ntBASIC1.11□□□□□ -2.23
CDH4P55283 RNU6-344P-201ENST00000516635 111 ntBASIC1.11□□□□□ -2.23
CDH4P55283 AC024995.1-201ENST00000523014 93 ntBASIC1.11□□□□□ -2.23
CDH4P55283 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.11□□□□□ -2.23
CDH4P55283 MIR4742-201ENST00000581069 85 ntBASIC1.11□□□□□ -2.23
CDH4P55283 AC093783.1-201ENST00000612976 329 ntBASIC1.11□□□□□ -2.23
CDH4P55283 AC090617.10-201ENST00000624308 134 ntBASIC1.11□□□□□ -2.23
CDH4P55283 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH4P55283 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CDH4P55283 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CDH4P55283 Y_RNA.3-201ENST00000362331 103 ntBASIC1.1□□□□□ -2.23
CDH4P55283 RNU6-1123P-201ENST00000362347 106 ntBASIC1.1□□□□□ -2.23
CDH4P55283 Y_RNA.100-201ENST00000363141 102 ntBASIC1.1□□□□□ -2.23
CDH4P55283 SNORD116-11-201ENST00000383882 92 ntBASIC1.1□□□□□ -2.23
CDH4P55283 RNU6-950P-201ENST00000384651 107 ntBASIC1.1□□□□□ -2.23
CDH4P55283 AC010154.1-201ENST00000425857 269 ntBASIC1.1□□□□□ -2.23
CDH4P55283 DAP3P1-201ENST00000441522 278 ntBASIC1.1□□□□□ -2.23
CDH4P55283 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH4P55283 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH4P55283 AC103851.1-201ENST00000506833 274 ntBASIC1.1□□□□□ -2.23
CDH4P55283 RNU1-142P-201ENST00000516682 145 ntBASIC1.1□□□□□ -2.23
CDH4P55283 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
CDH4P55283 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH4P55283 AC027288.2-201ENST00000553028 243 ntBASIC1.1□□□□□ -2.23
CDH4P55283 POLR3GP2-201ENST00000588366 668 ntBASIC1.1□□□□□ -2.23
CDH4P55283 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
CDH4P55283 snoZ196.1-201ENST00000625269 89 ntBASIC1.1□□□□□ -2.23
CDH4P55283 Y_RNA.9-201ENST00000362354 101 ntBASIC1.09□□□□□ -2.23
CDH4P55283 RNU6-623P-201ENST00000363143 105 ntBASIC1.09□□□□□ -2.23
CDH4P55283 RNU4-9P-201ENST00000364951 139 ntBASIC1.09□□□□□ -2.23
CDH4P55283 Y_RNA.450-201ENST00000384198 113 ntBASIC1.09□□□□□ -2.23
CDH4P55283 MIR32-201ENST00000384965 70 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
CDH4P55283 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AC008134.1-201ENST00000420943 193 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH4P55283 PGBD4P5-201ENST00000445958 426 ntBASIC1.09□□□□□ -2.23
CDH4P55283 RPS29P25-201ENST00000481709 171 ntBASIC1.09□□□□□ -2.23
CDH4P55283 RNA5SP54-201ENST00000516951 92 ntBASIC1.09□□□□□ -2.23
CDH4P55283 RNU6-58P-201ENST00000517143 103 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AK6P2-201ENST00000549020 471 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH4P55283 MIR5696-201ENST00000578474 85 ntBASIC1.09□□□□□ -2.23
CDH4P55283 MIR3664-201ENST00000579074 99 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AC021506.2-201ENST00000612354 169 ntBASIC1.09□□□□□ -2.23
CDH4P55283 MIR8070-201ENST00000616510 88 ntBASIC1.09□□□□□ -2.23
CDH4P55283 AC006504.8-201ENST00000621046 635 ntBASIC1.09□□□□□ -2.23
CDH4P55283 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.09□□□□□ -2.23
CDH4P55283 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH4P55283 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH4P55283 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDH4P55283 Y_RNA.89-201ENST00000363031 102 ntBASIC1.08□□□□□ -2.24
CDH4P55283 Y_RNA.238-201ENST00000364441 102 ntBASIC1.08□□□□□ -2.24
CDH4P55283 RNU6-245P-201ENST00000384020 107 ntBASIC1.08□□□□□ -2.24
CDH4P55283 RNU6-373P-201ENST00000411247 98 ntBASIC1.08□□□□□ -2.24
CDH4P55283 RPL30P10-201ENST00000488148 337 ntBASIC1.08□□□□□ -2.24
CDH4P55283 RNU6-864P-201ENST00000516256 108 ntBASIC1.08□□□□□ -2.24
CDH4P55283 RNU6-1314P-201ENST00000517139 104 ntBASIC1.08□□□□□ -2.24
CDH4P55283 AC025647.1-201ENST00000517879 253 ntBASIC1.08□□□□□ -2.24
CDH4P55283 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.08□□□□□ -2.24
CDH4P55283 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.08□□□□□ -2.24
CDH4P55283 AC124303.1-201ENST00000605703 360 ntBASIC1.08□□□□□ -2.24
CDH4P55283 AC019193.3-201ENST00000609144 554 ntBASIC1.08□□□□□ -2.24
CDH4P55283 AC068647.2-201ENST00000637380 353 ntBASIC1.08□□□□□ -2.24
CDH4P55283 U6.108-201ENST00000637764 58 ntBASIC1.08□□□□□ -2.24
CDH4P55283 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
CDH4P55283 RNU4-40P-201ENST00000364351 143 ntBASIC1.07□□□□□ -2.24
CDH4P55283 RNU6-1240P-201ENST00000365155 104 ntBASIC1.07□□□□□ -2.24
CDH4P55283 Y_RNA.516-201ENST00000384541 124 ntBASIC1.07□□□□□ -2.24
CDH4P55283 RNU6-831P-201ENST00000384548 107 ntBASIC1.07□□□□□ -2.24
CDH4P55283 RNU6-306P-201ENST00000384617 107 ntBASIC1.07□□□□□ -2.24
CDH4P55283 SNORD116-4-201ENST00000384733 96 ntBASIC1.07□□□□□ -2.24
CDH4P55283 AL606517.2-201ENST00000442855 241 ntBASIC1.07□□□□□ -2.24
CDH4P55283 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.07□□□□□ -2.24
CDH4P55283 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
CDH4P55283 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH4P55283 RNU6-221P-201ENST00000459541 99 ntBASIC1.07□□□□□ -2.24
CDH4P55283 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
CDH4P55283 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.07□□□□□ -2.24
CDH4P55283 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
CDH4P55283 RNU6-1088P-201ENST00000516850 104 ntBASIC1.07□□□□□ -2.24
CDH4P55283 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.07□□□□□ -2.24
CDH4P55283 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.07□□□□□ -2.24
CDH4P55283 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
CDH4P55283 AL359075.3-201ENST00000613288 217 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms