Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPL23AP3-201ENST00000453844 468 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.2□□□□□ -2.06
NR1H2P55055 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
NR1H2P55055 CYCSP23-201ENST00000519781 313 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 MIR4769-201ENST00000584126 77 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 RPS29P30-201ENST00000600975 111 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 AL109918.3-201ENST00000603072 338 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 AL357075.2-201ENST00000614906 189 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.2□□□□□ -2.06
NR1H2P55055 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 AL078596.1-201ENST00000624856 447 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 AC008873.1-201ENST00000625051 138 ntBASIC2.2□□□□□ -2.06
NR1H2P55055 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.2□□□□□ -2.06
NR1H2P55055 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NR1H2P55055 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NR1H2P55055 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RNU6-975P-201ENST00000384296 105 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RNU6-1235P-201ENST00000384559 107 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 MIR597-201ENST00000384968 97 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 MIR504-201ENST00000385065 83 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 AL590004.1-201ENST00000405321 300 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 AC096920.1-201ENST00000423991 241 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 UQCRBP2-201ENST00000447827 297 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 PCNPP5-201ENST00000452246 481 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RNU6-498P-201ENST00000459468 107 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 AC010531.2-201ENST00000465012 153 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 UBL5P3-201ENST00000475112 231 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 HMGN2P9-201ENST00000476875 229 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RPS29P21-201ENST00000496272 170 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 AC010469.2-201ENST00000496412 480 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RNA5SP320-201ENST00000516263 124 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 RNU6-856P-201ENST00000516959 98 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 AC040926.1-201ENST00000530195 238 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.19□□□□□ -2.06
NR1H2P55055 AC104695.3-201ENST00000604052 296 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 Y_RNA.812-201ENST00000610788 101 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 Y_RNA.784-201ENST00000613803 101 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 Y_RNA.787-201ENST00000616522 101 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 Y_RNA.780-201ENST00000617336 101 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 Y_RNA.801-201ENST00000619005 101 ntBASIC2.19□□□□□ -2.06
NR1H2P55055 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.19□□□□□ -2.06
NR1H2P55055 AL159152.1-201ENST00000635019 2587 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NR1H2P55055 Y_RNA.158-201ENST00000363651 101 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 AC117470.1-201ENST00000381974 330 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 SNORA48.1-201ENST00000390879 135 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 SNORD78.2-201ENST00000391076 69 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NR1H2P55055 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.18□□□□□ -2.06
NR1H2P55055 RNU6-107P-201ENST00000516643 102 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.18□□□□□ -2.06
NR1H2P55055 AL353621.2-201ENST00000605340 133 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.18□□□□□ -2.06
NR1H2P55055 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.18□□□□□ -2.06
NR1H2P55055 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 AC011476.5-201ENST00000615594 130 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 AL162373.1-201ENST00000620433 407 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 U6.92-201ENST00000636464 89 ntBASIC2.18□□□□□ -2.06
NR1H2P55055 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NR1H2P55055 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU6-450P-201ENST00000364654 107 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 Y_RNA.389-201ENST00000383924 113 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU6-418P-201ENST00000384035 107 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU6-639P-201ENST00000384074 107 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 Y_RNA.526-201ENST00000384572 110 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 AC016717.1-201ENST00000448918 286 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 ATP5J2P3-201ENST00000451550 258 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.17□□□□□ -2.06
NR1H2P55055 AC093852.1-201ENST00000503587 266 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 SNORA40.9-201ENST00000515895 93 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU6-1146P-201ENST00000516282 102 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 RNU6-1012P-201ENST00000516606 109 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
NR1H2P55055 AK6P2-201ENST00000549020 471 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 MIR4659A-201ENST00000580269 81 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 MIR4680-201ENST00000580906 66 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 AC124312.5-201ENST00000604451 268 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.17□□□□□ -2.06
NR1H2P55055 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 AC007742.2-201ENST00000618226 398 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
NR1H2P55055 MIR340-201ENST00000362125 95 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNA5SP276-201ENST00000362580 94 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 Y_RNA.498-201ENST00000384460 102 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 Y_RNA.527-201ENST00000384573 102 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 MIR548B-201ENST00000385247 97 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNU6-823P-201ENST00000391042 103 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 AL359511.1-201ENST00000402970 211 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNU6-101P-201ENST00000410323 104 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 RNA5SP501-201ENST00000410990 112 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 ELOCP21-201ENST00000412558 336 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
NR1H2P55055 FCF1P4-201ENST00000448326 183 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms