Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL161788.1-201ENST00000441805 169 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.66□□□□□ -1.82
EPHA4P54764 SNORD33.1-201ENST00000516213 88 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 RNU6-1146P-201ENST00000516282 102 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 RNU7-149P-201ENST00000516739 59 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 RNU6-365P-201ENST00000517113 106 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 MIR4679-2-201ENST00000578358 77 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 AC108081.1-201ENST00000604358 221 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 AL121890.5-201ENST00000620848 304 ntBASIC3.66□□□□□ -1.82
EPHA4P54764 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
EPHA4P54764 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EPHA4P54764 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EPHA4P54764 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
EPHA4P54764 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
EPHA4P54764 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
EPHA4P54764 Y_RNA.796-201ENST00000364268 102 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 SNORA73.2-201ENST00000364946 201 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 Y_RNA.799-201ENST00000364992 102 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 MIR562-201ENST00000384894 95 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 MIR218-1-201ENST00000384999 110 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 Y_RNA.621-201ENST00000411065 96 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.65□□□□□ -1.83
EPHA4P54764 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 RN7SKP18-201ENST00000516005 275 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.65□□□□□ -1.83
EPHA4P54764 MIR3199-1-201ENST00000582434 88 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 MIR3117-201ENST00000584034 78 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.65□□□□□ -1.83
EPHA4P54764 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
EPHA4P54764 MIR1248-201ENST00000629190 106 ntBASIC3.65□□□□□ -1.83
EPHA4P54764 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.65□□□□□ -1.83
EPHA4P54764 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EPHA4P54764 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
EPHA4P54764 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
EPHA4P54764 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.83
EPHA4P54764 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
EPHA4P54764 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EPHA4P54764 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
EPHA4P54764 SNORA71.3-201ENST00000362582 128 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 RNA5SP119-201ENST00000362715 117 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 SNORD116-21-201ENST00000384507 92 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 FO393413.1-201ENST00000402892 195 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 RNU6-1231P-201ENST00000517185 103 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 RNU1-104P-201ENST00000517280 175 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 SNORA62.6-201ENST00000606322 83 ntBASIC3.64□□□□□ -1.83
EPHA4P54764 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.64□□□□□ -1.83
EPHA4P54764 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
EPHA4P54764 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.64□□□□□ -1.83
EPHA4P54764 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
EPHA4P54764 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
EPHA4P54764 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
EPHA4P54764 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
EPHA4P54764 RNU6-743P-201ENST00000364151 106 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 SNORD58C-201ENST00000365223 64 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 Y_RNA.346-201ENST00000365385 112 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 MIR7-3-201ENST00000384898 110 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 MIR624-201ENST00000385217 97 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 RPS15AP28-201ENST00000435088 386 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 AC091153.1-201ENST00000466297 402 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 SEM1P1-201ENST00000506694 209 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 RNU6-1096P-201ENST00000517089 102 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 AC009093.8-201ENST00000641769 292 ntBASIC3.63□□□□□ -1.83
EPHA4P54764 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.63□□□□□ -1.83
EPHA4P54764 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
EPHA4P54764 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
EPHA4P54764 GABRG2-229ENST00000641017 3628 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.62□□□□□ -1.83
EPHA4P54764 Y_RNA.43-201ENST00000362670 111 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 Y_RNA.242-201ENST00000364473 110 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
EPHA4P54764 RNA5SP424-201ENST00000390988 115 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 AC123900.1-201ENST00000420390 96 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 HMGN2P34-201ENST00000437647 269 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 AC025750.2-201ENST00000442609 450 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 CYCSP35-201ENST00000451978 304 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 SNORD105B-201ENST00000458770 79 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.62□□□□□ -1.83
EPHA4P54764 RNU6-504P-201ENST00000516568 104 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 RNA5SP170-201ENST00000517150 101 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.62□□□□□ -1.83
EPHA4P54764 MIR3613-201ENST00000579844 87 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 MIR3944-201ENST00000581277 108 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 AC091178.2-201ENST00000584401 117 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 MIR7515-201ENST00000637837 67 ntBASIC3.62□□□□□ -1.83
EPHA4P54764 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
EPHA4P54764 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
EPHA4P54764 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EPHA4P54764 RNA5SP267-201ENST00000364893 126 ntBASIC3.61□□□□□ -1.83
EPHA4P54764 RNU1-101P-201ENST00000391171 127 ntBASIC3.61□□□□□ -1.83
EPHA4P54764 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.61□□□□□ -1.83
EPHA4P54764 MTCO1P44-201ENST00000441935 243 ntBASIC3.61□□□□□ -1.83
EPHA4P54764 RPS26P45-201ENST00000471748 340 ntBASIC3.61□□□□□ -1.83
EPHA4P54764 AC106707.2-201ENST00000484182 374 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms