Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU6-541P-201ENST00000384709 110 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 MIR607-201ENST00000385241 96 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 BTF3L4P2-201ENST00000392798 346 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 MIR548H3-201ENST00000408771 118 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 SRIP3-201ENST00000413200 219 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.65□□□□□ -2.15
COL4A4P53420 MTND3P9-201ENST00000429526 346 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A4P53420 AC016700.2-201ENST00000446011 156 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.65□□□□□ -2.15
COL4A4P53420 AL359273.1-201ENST00000510918 627 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 RNU7-175P-201ENST00000515915 61 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.65□□□□□ -2.15
COL4A4P53420 AK6P2-201ENST00000549020 471 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AC103996.1-201ENST00000555468 102 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 AC123912.5-201ENST00000605470 343 ntBASIC1.65□□□□□ -2.15
COL4A4P53420 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A4P53420 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
COL4A4P53420 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL4A4P53420 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.16-201ENST00000362421 102 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU6-1301P-201ENST00000362724 104 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.170-201ENST00000363746 110 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU6-704P-201ENST00000364162 103 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.292-201ENST00000364904 97 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.358-201ENST00000365491 99 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU1-109P-201ENST00000383960 147 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.506-201ENST00000384494 102 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 MIR144-201ENST00000384886 86 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 SNORA12.2-201ENST00000391040 156 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU6-1025P-201ENST00000410629 104 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RN7SKP51-201ENST00000410781 304 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AC092047.1-201ENST00000424997 240 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 HMGN2P13-201ENST00000476476 274 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RPL23AP75-201ENST00000491601 451 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RPS23P5-201ENST00000495419 428 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 SUMO2P6-201ENST00000505273 288 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.703-201ENST00000516846 111 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.64□□□□□ -2.15
COL4A4P53420 MRPS18CP4-201ENST00000535821 231 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AP002392.1-201ENST00000537692 208 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 SYF2P1-201ENST00000550658 413 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 MIR548AI-201ENST00000579940 88 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 MIR3133-201ENST00000583157 78 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A4P53420 AL390123.1-201ENST00000603216 237 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.772-201ENST00000606692 102 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AC240442.1-201ENST00000616055 283 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A4P53420 MTND5P9-201ENST00000503854 1755 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A4P53420 SNORD81.1-201ENST00000363064 77 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.199-201ENST00000364014 102 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU6-280P-201ENST00000364145 104 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNY4P28-201ENST00000365281 93 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 SNORD50.2-201ENST00000365465 70 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU6-395P-201ENST00000365662 106 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU6-1081P-201ENST00000384537 107 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.518-201ENST00000384552 113 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AP000567.1-201ENST00000406413 156 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.592-201ENST00000410274 109 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.623-201ENST00000411128 95 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 RNU2-32P-201ENST00000411193 191 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AL590556.1-201ENST00000423231 483 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 MTATP6P4-201ENST00000427725 675 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 HMGN2P20-201ENST00000437531 273 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AC010469.2-201ENST00000496412 480 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.683-201ENST00000516508 93 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.64□□□□□ -2.15
COL4A4P53420 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A4P53420 MIR4474-201ENST00000579189 78 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 MIR548AC-201ENST00000585049 88 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 AL136164.4-201ENST00000625013 2135 ntBASIC1.64□□□□□ -2.15
COL4A4P53420 Y_RNA.8-201ENST00000362353 102 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU5A-1-201ENST00000362698 116 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU4-90P-201ENST00000362773 141 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 Y_RNA.76-201ENST00000362931 109 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 SNORA7.2-201ENST00000364446 145 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU6-827P-201ENST00000365553 106 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU6-166P-201ENST00000384371 107 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 MIR521-1-201ENST00000384902 87 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 MIR628-201ENST00000385229 95 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 MIR301A-201ENST00000385261 86 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 Y_RNA.581-201ENST00000391017 97 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU6-882P-201ENST00000391025 103 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 SNORA53-201ENST00000391141 249 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 MIR190B-201ENST00000401119 79 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A4P53420 RNU6-1135P-201ENST00000411083 103 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 Y_RNA.793-201ENST00000411222 111 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 Z85995.1-201ENST00000415547 335 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 AC079354.2-201ENST00000453523 154 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 HSPE1P25-201ENST00000455484 251 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 U8.22-201ENST00000459141 133 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 AL160314.1-201ENST00000490836 438 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms