Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MIR302D-201ENST00000362275 68 ntBASIC1.21□□□□□ -2.22
MSH6P52701 Y_RNA.67-201ENST00000362870 100 ntBASIC1.21□□□□□ -2.22
MSH6P52701 MIR586-201ENST00000385035 97 ntBASIC1.21□□□□□ -2.22
MSH6P52701 MIR548B-201ENST00000385247 97 ntBASIC1.21□□□□□ -2.22
MSH6P52701 AL161935.2-201ENST00000414627 60 ntBASIC1.21□□□□□ -2.22
MSH6P52701 MTCO3P29-201ENST00000432119 779 ntBASIC1.21□□□□□ -2.22
MSH6P52701 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.21□□□□□ -2.22
MSH6P52701 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.21□□□□□ -2.22
MSH6P52701 MTND1P11-201ENST00000456661 876 ntBASIC1.21□□□□□ -2.22
MSH6P52701 RNA5SP121-201ENST00000516537 101 ntBASIC1.21□□□□□ -2.22
MSH6P52701 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
MSH6P52701 AC138907.6-201ENST00000568401 126 ntBASIC1.21□□□□□ -2.22
MSH6P52701 AC103591.3-201ENST00000608684 209 ntBASIC1.21□□□□□ -2.22
MSH6P52701 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.21□□□□□ -2.22
MSH6P52701 AC048344.4-201ENST00000619744 527 ntBASIC1.21□□□□□ -2.22
MSH6P52701 SCARNA4-201ENST00000629045 128 ntBASIC1.21□□□□□ -2.22
MSH6P52701 Y_RNA.41-201ENST00000362646 102 ntBASIC1.2□□□□□ -2.22
MSH6P52701 Y_RNA.151-201ENST00000363566 112 ntBASIC1.2□□□□□ -2.22
MSH6P52701 RNY3P3-201ENST00000363816 102 ntBASIC1.2□□□□□ -2.22
MSH6P52701 Y_RNA.256-201ENST00000364594 104 ntBASIC1.2□□□□□ -2.22
MSH6P52701 Y_RNA.458-201ENST00000384240 102 ntBASIC1.2□□□□□ -2.22
MSH6P52701 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
MSH6P52701 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
MSH6P52701 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.2□□□□□ -2.22
MSH6P52701 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
MSH6P52701 AL353572.1-201ENST00000442490 417 ntBASIC1.2□□□□□ -2.22
MSH6P52701 MTND2P22-201ENST00000444325 1033 ntBASIC1.2□□□□□ -2.22
MSH6P52701 AC114982.1-201ENST00000469402 321 ntBASIC1.2□□□□□ -2.22
MSH6P52701 MIR8087-201ENST00000612745 78 ntBASIC1.2□□□□□ -2.22
MSH6P52701 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.2□□□□□ -2.22
MSH6P52701 Y_RNA.38-201ENST00000362617 102 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNU6-451P-201ENST00000362921 107 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNA5SP62-201ENST00000363457 110 ntBASIC1.19□□□□□ -2.22
MSH6P52701 SNORD115-8-201ENST00000363856 82 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNU6-1305P-201ENST00000364353 104 ntBASIC1.19□□□□□ -2.22
MSH6P52701 SNORD115-38-201ENST00000365037 82 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNU6-716P-201ENST00000365621 103 ntBASIC1.19□□□□□ -2.22
MSH6P52701 Y_RNA.559-201ENST00000384686 107 ntBASIC1.19□□□□□ -2.22
MSH6P52701 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
MSH6P52701 MIR487A-201ENST00000385009 80 ntBASIC1.19□□□□□ -2.22
MSH6P52701 ZNF885P-201ENST00000420174 1098 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AC069257.2-201ENST00000441819 155 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AC073910.1-201ENST00000445047 438 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AC079354.2-201ENST00000453523 154 ntBASIC1.19□□□□□ -2.22
MSH6P52701 PCMTD1P1-201ENST00000455560 355 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNU7-57P-201ENST00000459540 60 ntBASIC1.19□□□□□ -2.22
MSH6P52701 HMGN2P26-201ENST00000463169 339 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RPS26P55-201ENST00000471178 356 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AC093534.1-201ENST00000504977 132 ntBASIC1.19□□□□□ -2.22
MSH6P52701 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.19□□□□□ -2.22
MSH6P52701 RNU6-344P-201ENST00000516635 111 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNA5SP54-201ENST00000516951 92 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.19□□□□□ -2.22
MSH6P52701 ZNF519P2-201ENST00000557032 169 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AC146944.4-201ENST00000602697 718 ntBASIC1.19□□□□□ -2.22
MSH6P52701 AL138726.1-201ENST00000614873 333 ntBASIC1.19□□□□□ -2.22
MSH6P52701 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.19□□□□□ -2.22
MSH6P52701 AC100821.1-201ENST00000523153 2479 ntBASIC1.18□□□□□ -2.22
MSH6P52701 ZNF204P-201ENST00000416749 2397 ntBASIC1.18□□□□□ -2.22
MSH6P52701 MIR330-201ENST00000362196 94 ntBASIC1.18□□□□□ -2.22
MSH6P52701 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
MSH6P52701 snoU2-30.2-201ENST00000362805 70 ntBASIC1.18□□□□□ -2.22
MSH6P52701 RNU6-95P-201ENST00000384697 107 ntBASIC1.18□□□□□ -2.22
MSH6P52701 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MSH6P52701 RNU6-332P-201ENST00000391193 108 ntBASIC1.18□□□□□ -2.22
MSH6P52701 AL590002.1-201ENST00000406554 418 ntBASIC1.18□□□□□ -2.22
MSH6P52701 MIR320B2-201ENST00000408479 138 ntBASIC1.18□□□□□ -2.22
MSH6P52701 RN7SKP200-201ENST00000410564 320 ntBASIC1.18□□□□□ -2.22
MSH6P52701 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.18□□□□□ -2.22
MSH6P52701 MTND3P21-201ENST00000433774 331 ntBASIC1.18□□□□□ -2.22
MSH6P52701 HMGN2P34-201ENST00000437647 269 ntBASIC1.18□□□□□ -2.22
MSH6P52701 TRBVA-201ENST00000498804 316 ntBASIC1.18□□□□□ -2.22
MSH6P52701 MTCO2P30-201ENST00000503662 364 ntBASIC1.18□□□□□ -2.22
MSH6P52701 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.18□□□□□ -2.22
MSH6P52701 RNU6-506P-201ENST00000516553 94 ntBASIC1.18□□□□□ -2.22
MSH6P52701 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
MSH6P52701 MIR3672-201ENST00000584290 82 ntBASIC1.18□□□□□ -2.22
MSH6P52701 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
MSH6P52701 AC099654.12-201ENST00000639868 649 ntBASIC1.18□□□□□ -2.22
MSH6P52701 Y_RNA.287-201ENST00000364853 94 ntBASIC1.17□□□□□ -2.22
MSH6P52701 RNU6-790P-201ENST00000384479 105 ntBASIC1.17□□□□□ -2.22
MSH6P52701 Y_RNA.517-201ENST00000384551 106 ntBASIC1.17□□□□□ -2.22
MSH6P52701 Y_RNA.530-201ENST00000384587 101 ntBASIC1.17□□□□□ -2.22
MSH6P52701 RNU7-66P-201ENST00000459469 62 ntBASIC1.17□□□□□ -2.22
MSH6P52701 AC099513.1-201ENST00000490423 301 ntBASIC1.17□□□□□ -2.22
MSH6P52701 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.17□□□□□ -2.22
MSH6P52701 RNU6-1146P-201ENST00000516282 102 ntBASIC1.17□□□□□ -2.22
MSH6P52701 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
MSH6P52701 AF250324.2-201ENST00000608299 610 ntBASIC1.17□□□□□ -2.22
MSH6P52701 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.17□□□□□ -2.22
MSH6P52701 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.17□□□□□ -2.22
MSH6P52701 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
MSH6P52701 RNU6-1252P-201ENST00000363054 104 ntBASIC1.16□□□□□ -2.22
MSH6P52701 RNU4-24P-201ENST00000364565 139 ntBASIC1.16□□□□□ -2.22
MSH6P52701 RNU4-9P-201ENST00000364951 139 ntBASIC1.16□□□□□ -2.22
MSH6P52701 RNU6-245P-201ENST00000384020 107 ntBASIC1.16□□□□□ -2.22
MSH6P52701 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.16□□□□□ -2.22
MSH6P52701 AL590632.1-201ENST00000424289 371 ntBASIC1.16□□□□□ -2.22
MSH6P52701 MTCO3P18-201ENST00000440206 761 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms