Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK3P51956 AL356320.1-201ENST00000429616 163 ntBASIC2.35□□□□□ -2.03
NEK3P51956 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.35□□□□□ -2.03
NEK3P51956 AC018634.1-201ENST00000437554 401 ntBASIC2.35□□□□□ -2.03
NEK3P51956 RPL23AP6-201ENST00000446637 472 ntBASIC2.35□□□□□ -2.03
NEK3P51956 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.35□□□□□ -2.03
NEK3P51956 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK3P51956 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
NEK3P51956 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
NEK3P51956 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
NEK3P51956 AC006600.1-201ENST00000572529 153 ntBASIC2.35□□□□□ -2.03
NEK3P51956 AL627230.6-201ENST00000611129 280 ntBASIC2.35□□□□□ -2.03
NEK3P51956 AL357075.2-201ENST00000614906 189 ntBASIC2.35□□□□□ -2.03
NEK3P51956 uc_338.22-201ENST00000622722 187 ntBASIC2.35□□□□□ -2.03
NEK3P51956 RNU1-96P-201ENST00000364163 162 ntBASIC2.34□□□□□ -2.03
NEK3P51956 RNU6-1019P-201ENST00000364424 107 ntBASIC2.34□□□□□ -2.03
NEK3P51956 RNA5SP475-201ENST00000410568 110 ntBASIC2.34□□□□□ -2.03
NEK3P51956 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
NEK3P51956 AC016909.1-201ENST00000415916 166 ntBASIC2.34□□□□□ -2.03
NEK3P51956 Z98742.3-201ENST00000418637 326 ntBASIC2.34□□□□□ -2.03
NEK3P51956 HMGN2P34-201ENST00000437647 269 ntBASIC2.34□□□□□ -2.03
NEK3P51956 AC093852.1-201ENST00000503587 266 ntBASIC2.34□□□□□ -2.03
NEK3P51956 RNVU1-2-201ENST00000516326 135 ntBASIC2.34□□□□□ -2.03
NEK3P51956 RNU6-1012P-201ENST00000516606 109 ntBASIC2.34□□□□□ -2.03
NEK3P51956 AC024995.1-201ENST00000523014 93 ntBASIC2.34□□□□□ -2.03
NEK3P51956 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
NEK3P51956 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
NEK3P51956 AC116312.1-201ENST00000606841 314 ntBASIC2.34□□□□□ -2.03
NEK3P51956 MIR3674-201ENST00000636576 68 ntBASIC2.34□□□□□ -2.03
NEK3P51956 MTND4P29-201ENST00000503122 1372 ntBASIC2.34□□□□□ -2.04
NEK3P51956 RNU6-862P-201ENST00000362804 105 ntBASIC2.33□□□□□ -2.04
NEK3P51956 U8.2-201ENST00000363156 134 ntBASIC2.33□□□□□ -2.04
NEK3P51956 Y_RNA.419-201ENST00000384041 102 ntBASIC2.33□□□□□ -2.04
NEK3P51956 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.33□□□□□ -2.04
NEK3P51956 SDAD1P3-201ENST00000427380 333 ntBASIC2.33□□□□□ -2.04
NEK3P51956 RAB28P5-201ENST00000427490 651 ntBASIC2.33□□□□□ -2.04
NEK3P51956 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
NEK3P51956 AC112492.4-201ENST00000456549 352 ntBASIC2.33□□□□□ -2.04
NEK3P51956 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
NEK3P51956 RNU4-77P-201ENST00000516692 156 ntBASIC2.33□□□□□ -2.04
NEK3P51956 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.33□□□□□ -2.04
NEK3P51956 AC010900.2-201ENST00000604508 210 ntBASIC2.33□□□□□ -2.04
NEK3P51956 SNORA51.11-201ENST00000384442 131 ntBASIC2.32□□□□□ -2.04
NEK3P51956 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
NEK3P51956 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.32□□□□□ -2.04
NEK3P51956 AL160004.2-201ENST00000432935 350 ntBASIC2.32□□□□□ -2.04
NEK3P51956 AC010598.1-201ENST00000510378 103 ntBASIC2.32□□□□□ -2.04
NEK3P51956 MRPS17P9-201ENST00000511924 393 ntBASIC2.32□□□□□ -2.04
NEK3P51956 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NEK3P51956 AL137100.2-201ENST00000555786 315 ntBASIC2.32□□□□□ -2.04
NEK3P51956 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
NEK3P51956 MIR5094-201ENST00000578766 85 ntBASIC2.32□□□□□ -2.04
NEK3P51956 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.32□□□□□ -2.04
NEK3P51956 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
NEK3P51956 AP000553.5-201ENST00000641933 54 ntBASIC2.32□□□□□ -2.04
NEK3P51956 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NEK3P51956 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NEK3P51956 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
NEK3P51956 AC245060.5-201ENST00000610778 3293 ntBASIC2.31□□□□□ -2.04
NEK3P51956 AC006026.1-201ENST00000444025 1803 ntBASIC2.31□□□□□ -2.04
NEK3P51956 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
NEK3P51956 Y_RNA.128-201ENST00000363391 112 ntBASIC2.31□□□□□ -2.04
NEK3P51956 RNY3P11-201ENST00000364153 102 ntBASIC2.31□□□□□ -2.04
NEK3P51956 Y_RNA.445-201ENST00000384168 102 ntBASIC2.31□□□□□ -2.04
NEK3P51956 RNY1P14-201ENST00000384426 108 ntBASIC2.31□□□□□ -2.04
NEK3P51956 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
NEK3P51956 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
NEK3P51956 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
NEK3P51956 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
NEK3P51956 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.31□□□□□ -2.04
NEK3P51956 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.31□□□□□ -2.04
NEK3P51956 AC022254.1-201ENST00000567857 235 ntBASIC2.31□□□□□ -2.04
NEK3P51956 MIR4713-201ENST00000582691 75 ntBASIC2.31□□□□□ -2.04
NEK3P51956 RPS29P30-201ENST00000600975 111 ntBASIC2.31□□□□□ -2.04
NEK3P51956 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.31□□□□□ -2.04
NEK3P51956 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
NEK3P51956 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.31□□□□□ -2.04
NEK3P51956 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NEK3P51956 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NEK3P51956 RNU11-5P-201ENST00000391216 129 ntBASIC2.3□□□□□ -2.04
NEK3P51956 RN7SKP223-201ENST00000410582 62 ntBASIC2.3□□□□□ -2.04
NEK3P51956 EBAG9P1-201ENST00000418955 543 ntBASIC2.3□□□□□ -2.04
NEK3P51956 CHEK2P4-201ENST00000450340 246 ntBASIC2.3□□□□□ -2.04
NEK3P51956 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
NEK3P51956 RNU1-41P-201ENST00000516161 162 ntBASIC2.3□□□□□ -2.04
NEK3P51956 RNU1-48P-201ENST00000516400 162 ntBASIC2.3□□□□□ -2.04
NEK3P51956 Y_RNA.713-201ENST00000517013 96 ntBASIC2.3□□□□□ -2.04
NEK3P51956 MIR1273D-201ENST00000577266 86 ntBASIC2.3□□□□□ -2.04
NEK3P51956 MIR5188-201ENST00000583467 113 ntBASIC2.3□□□□□ -2.04
NEK3P51956 AL096840.1-201ENST00000603287 93 ntBASIC2.3□□□□□ -2.04
NEK3P51956 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
NEK3P51956 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.3□□□□□ -2.04
NEK3P51956 AC010205.1-201ENST00000616668 449 ntBASIC2.3□□□□□ -2.04
NEK3P51956 MIR6873-201ENST00000622788 63 ntBASIC2.3□□□□□ -2.04
NEK3P51956 AC134503.1-201ENST00000633048 54 ntBASIC2.3□□□□□ -2.04
NEK3P51956 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NEK3P51956 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEK3P51956 MIR369-201ENST00000362155 70 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
NEK3P51956 SNORD114-7-201ENST00000362520 77 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms