Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 RNU6-264P-201ENST00000517134 104 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 RNU6-58P-201ENST00000517143 103 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 DEFB131C-201ENST00000528817 165 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 HSBP1P1-201ENST00000555205 166 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.85□□□□□ -2.11
CLCN4P51793 AC026470.2-201ENST00000561492 181 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 MIR4719-201ENST00000585233 84 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 AC016727.2-201ENST00000603988 621 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 AC022140.2-201ENST00000623500 188 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 AC138305.3-201ENST00000624988 240 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 AC134503.1-201ENST00000633048 54 ntBASIC1.85□□□□□ -2.11
CLCN4P51793 RNU1-58P-201ENST00000362413 163 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNU1-76P-201ENST00000362903 159 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 Y_RNA.319-201ENST00000365138 92 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 Y_RNA.364-201ENST00000365532 101 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 SNORA18.2-201ENST00000383865 132 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNU6-245P-201ENST00000384020 107 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNU6-474P-201ENST00000384243 107 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNU6-160P-201ENST00000384591 107 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNU6-159P-201ENST00000391080 106 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RNU6-1156P-201ENST00000410365 100 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 AC007098.1-201ENST00000420122 367 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 MTND1P14-201ENST00000427400 950 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 RPL23AP50-201ENST00000434149 455 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
CLCN4P51793 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.84□□□□□ -2.11
CLCN4P51793 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 Y_RNA.706-201ENST00000516933 99 ntBASIC1.84□□□□□ -2.11
CLCN4P51793 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCN4P51793 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCN4P51793 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCN4P51793 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCN4P51793 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CLCN4P51793 MIR369-201ENST00000362155 70 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 Y_RNA.106-201ENST00000363189 100 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 Y_RNA.128-201ENST00000363391 112 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 Y_RNA.332-201ENST00000365271 113 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 RNU6-1227P-201ENST00000383981 107 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 MIR10B-201ENST00000385011 110 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 AC123900.1-201ENST00000420390 96 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 PMCHL1-202ENST00000423102 261 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCN4P51793 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 EIF1P2-201ENST00000428233 350 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 AL035666.1-201ENST00000446195 348 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 TOMM22P6-201ENST00000465035 409 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 AP000870.1-201ENST00000472927 406 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 RNU6-1114P-201ENST00000516022 107 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 RNU6-911P-201ENST00000516523 104 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 RNU7-4P-201ENST00000516961 62 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCN4P51793 AC020661.2-201ENST00000560114 134 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 AC090617.3-201ENST00000573670 475 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
CLCN4P51793 AL359821.1-201ENST00000605519 182 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCN4P51793 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
CLCN4P51793 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCN4P51793 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CLCN4P51793 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.82□□□□□ -2.12
CLCN4P51793 RNU4-42P-201ENST00000364738 142 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 Y_RNA.428-201ENST00000384078 102 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR597-201ENST00000384968 97 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR625-201ENST00000385047 85 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 AC004866.1-201ENST00000411748 78 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.82□□□□□ -2.12
CLCN4P51793 MTCO2P12-201ENST00000427426 682 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 Y_RNA.631-201ENST00000459607 101 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 AC105758.1-201ENST00000506038 399 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.82□□□□□ -2.12
CLCN4P51793 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.82□□□□□ -2.12
CLCN4P51793 Y_RNA.711-201ENST00000516993 102 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR1244-1-201ENST00000612829 85 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 AC005562.2-201ENST00000618264 111 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR1244-3-201ENST00000635744 85 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR1244-2-201ENST00000636449 85 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 MIR1244-4-202ENST00000636813 85 ntBASIC1.82□□□□□ -2.12
CLCN4P51793 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLCN4P51793 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CLCN4P51793 Y_RNA.31-201ENST00000362574 102 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 Y_RNA.132-201ENST00000363421 102 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 SNORD31B-201ENST00000364977 69 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 RNY1P14-201ENST00000384426 108 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 MIR548P-201ENST00000408336 84 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 MIR320B2-201ENST00000408479 138 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 MIR1287-201ENST00000408492 90 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 Y_RNA.592-201ENST00000410274 109 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 AC092423.1-201ENST00000430165 186 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.81□□□□□ -2.12
CLCN4P51793 AC004386.2-201ENST00000441858 148 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 CHEK2P4-201ENST00000450340 246 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 AL163540.1-201ENST00000485382 386 ntBASIC1.81□□□□□ -2.12
CLCN4P51793 AC005840.1-201ENST00000498412 377 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms