Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
RAB28P51157 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RAB28P51157 MIR424-201ENST00000362227 98 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNA5SP99-201ENST00000364020 114 ntBASIC1.72□□□□□ -2.13
RAB28P51157 SNORA63D-201ENST00000364359 132 ntBASIC1.72□□□□□ -2.13
RAB28P51157 Y_RNA.390-201ENST00000383932 102 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNA5SP213-201ENST00000391031 106 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNA5SP467-201ENST00000391274 118 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNU6-370P-201ENST00000411008 104 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNU6-1001P-201ENST00000411265 100 ntBASIC1.72□□□□□ -2.13
RAB28P51157 EIF1P2-201ENST00000428233 350 ntBASIC1.72□□□□□ -2.13
RAB28P51157 AC069257.2-201ENST00000441819 155 ntBASIC1.72□□□□□ -2.13
RAB28P51157 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB28P51157 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB28P51157 RPL36AP21-201ENST00000490372 323 ntBASIC1.72□□□□□ -2.13
RAB28P51157 HMGN1P12-201ENST00000499125 195 ntBASIC1.72□□□□□ -2.13
RAB28P51157 AC025465.3-201ENST00000510570 311 ntBASIC1.72□□□□□ -2.13
RAB28P51157 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNU6-107P-201ENST00000516643 102 ntBASIC1.72□□□□□ -2.13
RAB28P51157 AC004584.2-201ENST00000570407 410 ntBASIC1.72□□□□□ -2.13
RAB28P51157 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.72□□□□□ -2.13
RAB28P51157 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.72□□□□□ -2.13
RAB28P51157 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB28P51157 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
RAB28P51157 SNORA72.2-201ENST00000365028 127 ntBASIC1.71□□□□□ -2.14
RAB28P51157 RNU6-1283P-201ENST00000365314 105 ntBASIC1.71□□□□□ -2.14
RAB28P51157 Y_RNA.557-201ENST00000384680 107 ntBASIC1.71□□□□□ -2.14
RAB28P51157 MIR515-2-201ENST00000384883 83 ntBASIC1.71□□□□□ -2.14
RAB28P51157 MIR515-1-201ENST00000384884 83 ntBASIC1.71□□□□□ -2.14
RAB28P51157 RNA5SP323-201ENST00000391094 133 ntBASIC1.71□□□□□ -2.14
RAB28P51157 RPL17P19-201ENST00000489069 552 ntBASIC1.71□□□□□ -2.14
RAB28P51157 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
RAB28P51157 AC091144.1-201ENST00000519573 138 ntBASIC1.71□□□□□ -2.14
RAB28P51157 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
RAB28P51157 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
RAB28P51157 AC125232.2-201ENST00000592457 143 ntBASIC1.71□□□□□ -2.14
RAB28P51157 RNU6-1266P-201ENST00000362794 105 ntBASIC1.7□□□□□ -2.14
RAB28P51157 Y_RNA.358-201ENST00000365491 99 ntBASIC1.7□□□□□ -2.14
RAB28P51157 RNU6-1304P-201ENST00000411374 106 ntBASIC1.7□□□□□ -2.14
RAB28P51157 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.7□□□□□ -2.14
RAB28P51157 AC073910.1-201ENST00000445047 438 ntBASIC1.7□□□□□ -2.14
RAB28P51157 MTND4P18-201ENST00000447010 465 ntBASIC1.7□□□□□ -2.14
RAB28P51157 AC005908.1-201ENST00000468701 347 ntBASIC1.7□□□□□ -2.14
RAB28P51157 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
RAB28P51157 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.7□□□□□ -2.14
RAB28P51157 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.7□□□□□ -2.14
RAB28P51157 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
RAB28P51157 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
RAB28P51157 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
RAB28P51157 AL355073.2-201ENST00000612106 557 ntBASIC1.7□□□□□ -2.14
RAB28P51157 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB28P51157 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB28P51157 RNU6-879P-201ENST00000364328 108 ntBASIC1.69□□□□□ -2.14
RAB28P51157 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.69□□□□□ -2.14
RAB28P51157 RNU6-360P-201ENST00000390944 104 ntBASIC1.69□□□□□ -2.14
RAB28P51157 MIR1267-201ENST00000408723 78 ntBASIC1.69□□□□□ -2.14
RAB28P51157 Y_RNA.595-201ENST00000410403 105 ntBASIC1.69□□□□□ -2.14
RAB28P51157 CYCSP49-201ENST00000420810 319 ntBASIC1.69□□□□□ -2.14
RAB28P51157 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB28P51157 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB28P51157 U8.22-201ENST00000459141 133 ntBASIC1.69□□□□□ -2.14
RAB28P51157 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
RAB28P51157 AC022868.1-201ENST00000517767 391 ntBASIC1.69□□□□□ -2.14
RAB28P51157 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB28P51157 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB28P51157 AC016925.2-201ENST00000605108 242 ntBASIC1.69□□□□□ -2.14
RAB28P51157 MIR1244-1-201ENST00000612829 85 ntBASIC1.69□□□□□ -2.14
RAB28P51157 MIR1244-3-201ENST00000635744 85 ntBASIC1.69□□□□□ -2.14
RAB28P51157 MIR1244-2-201ENST00000636449 85 ntBASIC1.69□□□□□ -2.14
RAB28P51157 MIR1244-4-202ENST00000636813 85 ntBASIC1.69□□□□□ -2.14
RAB28P51157 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB28P51157 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB28P51157 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RAB28P51157 RNA5SP361-201ENST00000362686 118 ntBASIC1.68□□□□□ -2.14
RAB28P51157 RNU6-1188P-201ENST00000363795 107 ntBASIC1.68□□□□□ -2.14
RAB28P51157 RNU6-99P-201ENST00000364721 107 ntBASIC1.68□□□□□ -2.14
RAB28P51157 MIR329-1-201ENST00000385028 80 ntBASIC1.68□□□□□ -2.14
RAB28P51157 Y_RNA.646-201ENST00000410980 101 ntBASIC1.68□□□□□ -2.14
RAB28P51157 UBE2V1P7-201ENST00000446395 340 ntBASIC1.68□□□□□ -2.14
RAB28P51157 UQCRBP2-201ENST00000447827 297 ntBASIC1.68□□□□□ -2.14
RAB28P51157 RPL26P26-201ENST00000480251 434 ntBASIC1.68□□□□□ -2.14
RAB28P51157 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.68□□□□□ -2.14
RAB28P51157 FRG2DP-202ENST00000566967 323 ntBASIC1.68□□□□□ -2.14
RAB28P51157 AC005730.3-201ENST00000583067 366 ntBASIC1.68□□□□□ -2.14
RAB28P51157 MIR5690-201ENST00000583739 73 ntBASIC1.68□□□□□ -2.14
RAB28P51157 Y_RNA.474-201ENST00000384341 102 ntBASIC1.67□□□□□ -2.14
RAB28P51157 RNU6-310P-201ENST00000384655 107 ntBASIC1.67□□□□□ -2.14
RAB28P51157 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
RAB28P51157 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB28P51157 RNU6-120P-201ENST00000516077 103 ntBASIC1.67□□□□□ -2.14
RAB28P51157 RNU6-559P-201ENST00000516151 98 ntBASIC1.67□□□□□ -2.14
RAB28P51157 RNA5SP458-201ENST00000516188 119 ntBASIC1.67□□□□□ -2.14
RAB28P51157 AC024995.1-201ENST00000523014 93 ntBASIC1.67□□□□□ -2.14
RAB28P51157 APOOP3-201ENST00000536787 586 ntBASIC1.67□□□□□ -2.14
RAB28P51157 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
RAB28P51157 AC113139.1-201ENST00000605049 239 ntBASIC1.67□□□□□ -2.14
RAB28P51157 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB28P51157 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
RAB28P51157 AC100821.1-201ENST00000523153 2479 ntBASIC1.66□□□□□ -2.14
RAB28P51157 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms