Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC040926.1-201ENST00000530195 238 ntBASIC2.37□□□□□ -2.03
CDK7P50613 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.37□□□□□ -2.03
CDK7P50613 AL390123.1-201ENST00000603216 237 ntBASIC2.37□□□□□ -2.03
CDK7P50613 MIR6845-201ENST00000613182 61 ntBASIC2.37□□□□□ -2.03
CDK7P50613 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
CDK7P50613 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.37□□□□□ -2.03
CDK7P50613 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDK7P50613 Y_RNA.27-201ENST00000362540 103 ntBASIC2.36□□□□□ -2.03
CDK7P50613 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
CDK7P50613 AC117470.1-201ENST00000381974 330 ntBASIC2.36□□□□□ -2.03
CDK7P50613 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
CDK7P50613 SNORD14D-201ENST00000384390 87 ntBASIC2.36□□□□□ -2.03
CDK7P50613 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
CDK7P50613 MIR1262-201ENST00000408276 93 ntBASIC2.36□□□□□ -2.03
CDK7P50613 FCF1P4-201ENST00000448326 183 ntBASIC2.36□□□□□ -2.03
CDK7P50613 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
CDK7P50613 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.36□□□□□ -2.03
CDK7P50613 SNORA40.9-201ENST00000515895 93 ntBASIC2.36□□□□□ -2.03
CDK7P50613 AP005660.1-201ENST00000522972 293 ntBASIC2.36□□□□□ -2.03
CDK7P50613 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.36□□□□□ -2.03
CDK7P50613 MIR4659A-201ENST00000580269 81 ntBASIC2.36□□□□□ -2.03
CDK7P50613 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.36□□□□□ -2.03
CDK7P50613 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.36□□□□□ -2.03
CDK7P50613 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
CDK7P50613 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
CDK7P50613 RNU4-50P-201ENST00000364361 141 ntBASIC2.35□□□□□ -2.03
CDK7P50613 SNORA72.2-201ENST00000365028 127 ntBASIC2.35□□□□□ -2.03
CDK7P50613 Y_RNA.338-201ENST00000365320 114 ntBASIC2.35□□□□□ -2.03
CDK7P50613 RNU6-1145P-201ENST00000384246 107 ntBASIC2.35□□□□□ -2.03
CDK7P50613 RNY3P4-201ENST00000384428 101 ntBASIC2.35□□□□□ -2.03
CDK7P50613 Y_RNA.527-201ENST00000384573 102 ntBASIC2.35□□□□□ -2.03
CDK7P50613 RNU6-57P-201ENST00000411348 103 ntBASIC2.35□□□□□ -2.03
CDK7P50613 MTCYBP6-201ENST00000441810 138 ntBASIC2.35□□□□□ -2.03
CDK7P50613 RNU6-625P-201ENST00000459412 107 ntBASIC2.35□□□□□ -2.03
CDK7P50613 RNU6-948P-201ENST00000516374 107 ntBASIC2.35□□□□□ -2.03
CDK7P50613 AL357075.2-201ENST00000614906 189 ntBASIC2.35□□□□□ -2.03
CDK7P50613 U6.92-201ENST00000636464 89 ntBASIC2.35□□□□□ -2.03
CDK7P50613 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDK7P50613 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CDK7P50613 Y_RNA.140-201ENST00000363474 103 ntBASIC2.34□□□□□ -2.03
CDK7P50613 SNORA33.2-201ENST00000365413 134 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.471-201ENST00000384312 102 ntBASIC2.34□□□□□ -2.03
CDK7P50613 MIR586-201ENST00000385035 97 ntBASIC2.34□□□□□ -2.03
CDK7P50613 RNA5SP475-201ENST00000410568 110 ntBASIC2.34□□□□□ -2.03
CDK7P50613 AC016925.1-201ENST00000458303 298 ntBASIC2.34□□□□□ -2.03
CDK7P50613 HMGN2P9-201ENST00000476875 229 ntBASIC2.34□□□□□ -2.03
CDK7P50613 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.721-201ENST00000517207 102 ntBASIC2.34□□□□□ -2.03
CDK7P50613 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK7P50613 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.34□□□□□ -2.03
CDK7P50613 AC018448.1-201ENST00000552843 316 ntBASIC2.34□□□□□ -2.03
CDK7P50613 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
CDK7P50613 MIR4719-201ENST00000585233 84 ntBASIC2.34□□□□□ -2.03
CDK7P50613 AC006504.6-201ENST00000590142 199 ntBASIC2.34□□□□□ -2.03
CDK7P50613 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.812-201ENST00000610788 101 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.784-201ENST00000613803 101 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.787-201ENST00000616522 101 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.780-201ENST00000617336 101 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.801-201ENST00000619005 101 ntBASIC2.34□□□□□ -2.03
CDK7P50613 AL162373.1-201ENST00000620433 407 ntBASIC2.34□□□□□ -2.03
CDK7P50613 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
CDK7P50613 Y_RNA.158-201ENST00000363651 101 ntBASIC2.33□□□□□ -2.04
CDK7P50613 Y_RNA.422-201ENST00000384054 114 ntBASIC2.33□□□□□ -2.04
CDK7P50613 RNU6-160P-201ENST00000384591 107 ntBASIC2.33□□□□□ -2.04
CDK7P50613 MIR524-201ENST00000385242 87 ntBASIC2.33□□□□□ -2.04
CDK7P50613 MIR548B-201ENST00000385247 97 ntBASIC2.33□□□□□ -2.04
CDK7P50613 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.33□□□□□ -2.04
CDK7P50613 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK7P50613 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
CDK7P50613 AC010469.2-201ENST00000496412 480 ntBASIC2.33□□□□□ -2.04
CDK7P50613 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
CDK7P50613 RNU6-475P-201ENST00000516073 104 ntBASIC2.33□□□□□ -2.04
CDK7P50613 AC233702.2-202ENST00000562547 291 ntBASIC2.33□□□□□ -2.04
CDK7P50613 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.33□□□□□ -2.04
CDK7P50613 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK7P50613 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CDK7P50613 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.32□□□□□ -2.04
CDK7P50613 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK7P50613 Y_RNA.164-201ENST00000363709 102 ntBASIC2.32□□□□□ -2.04
CDK7P50613 SNORA3A-201ENST00000364113 130 ntBASIC2.32□□□□□ -2.04
CDK7P50613 Y_RNA.332-201ENST00000365271 113 ntBASIC2.32□□□□□ -2.04
CDK7P50613 RNU11-3P-201ENST00000391111 133 ntBASIC2.32□□□□□ -2.04
CDK7P50613 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.32□□□□□ -2.04
CDK7P50613 AC112492.4-201ENST00000456549 352 ntBASIC2.32□□□□□ -2.04
CDK7P50613 AC074133.1-201ENST00000515696 183 ntBASIC2.32□□□□□ -2.04
CDK7P50613 RNU6-397P-201ENST00000516226 104 ntBASIC2.32□□□□□ -2.04
CDK7P50613 MIR4498-201ENST00000577599 66 ntBASIC2.32□□□□□ -2.04
CDK7P50613 AL353621.2-201ENST00000605340 133 ntBASIC2.32□□□□□ -2.04
CDK7P50613 Y_RNA.772-201ENST00000606692 102 ntBASIC2.32□□□□□ -2.04
CDK7P50613 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK7P50613 AC240442.1-201ENST00000616055 283 ntBASIC2.32□□□□□ -2.04
CDK7P50613 AC006001.4-201ENST00000622243 395 ntBASIC2.32□□□□□ -2.04
CDK7P50613 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDK7P50613 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDK7P50613 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDK7P50613 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDK7P50613 LINC02555-201ENST00000563933 1951 ntBASIC2.31□□□□□ -2.04
CDK7P50613 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
CDK7P50613 U3.8-201ENST00000363675 217 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms