Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNA5SP467-201ENST00000391274 118 ntBASIC1.15□□□□□ -2.23
CASP4P49662 RPL21P1-201ENST00000399532 476 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.15□□□□□ -2.23
CASP4P49662 MTATP6P26-201ENST00000445926 662 ntBASIC1.15□□□□□ -2.23
CASP4P49662 MTCO2P7-201ENST00000446518 666 ntBASIC1.15□□□□□ -2.23
CASP4P49662 COX6CP14-201ENST00000469580 174 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
CASP4P49662 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.15□□□□□ -2.23
CASP4P49662 MIR4742-201ENST00000581069 85 ntBASIC1.15□□□□□ -2.23
CASP4P49662 7SK.7-201ENST00000603504 247 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AC016727.1-205ENST00000605437 569 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AF250324.2-201ENST00000608299 610 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AC009033.1-201ENST00000624279 431 ntBASIC1.15□□□□□ -2.23
CASP4P49662 AC024614.3-201ENST00000637860 256 ntBASIC1.15□□□□□ -2.23
CASP4P49662 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CASP4P49662 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CASP4P49662 MTND4P12-201ENST00000498999 1377 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RNU6-873P-201ENST00000363833 107 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RNU6-280P-201ENST00000364145 104 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RNA5SP259-201ENST00000365541 109 ntBASIC1.14□□□□□ -2.23
CASP4P49662 SNORD116-11-201ENST00000383882 92 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RNU6-17P-201ENST00000384245 107 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RNU6-18P-201ENST00000384527 107 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RNU6-541P-201ENST00000384709 110 ntBASIC1.14□□□□□ -2.23
CASP4P49662 RPL37P10-201ENST00000412884 288 ntBASIC1.14□□□□□ -2.23
CASP4P49662 AC092473.1-201ENST00000441098 221 ntBASIC1.14□□□□□ -2.23
CASP4P49662 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.14□□□□□ -2.23
CASP4P49662 RNU6-1053P-201ENST00000515930 101 ntBASIC1.14□□□□□ -2.23
CASP4P49662 AL137100.2-201ENST00000555786 315 ntBASIC1.14□□□□□ -2.23
CASP4P49662 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.14□□□□□ -2.23
CASP4P49662 MIR5696-201ENST00000578474 85 ntBASIC1.14□□□□□ -2.23
CASP4P49662 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
CASP4P49662 AL365434.2-201ENST00000607979 234 ntBASIC1.14□□□□□ -2.23
CASP4P49662 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.14□□□□□ -2.23
CASP4P49662 MIR8065-201ENST00000620577 100 ntBASIC1.14□□□□□ -2.23
CASP4P49662 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.14□□□□□ -2.23
CASP4P49662 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CASP4P49662 Y_RNA.9-201ENST00000362354 101 ntBASIC1.13□□□□□ -2.23
CASP4P49662 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.13□□□□□ -2.23
CASP4P49662 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
CASP4P49662 RNU6-159P-201ENST00000391080 106 ntBASIC1.13□□□□□ -2.23
CASP4P49662 MIR1185-2-201ENST00000408687 86 ntBASIC1.13□□□□□ -2.23
CASP4P49662 RN7SKP200-201ENST00000410564 320 ntBASIC1.13□□□□□ -2.23
CASP4P49662 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
CASP4P49662 MTATP6P13-201ENST00000438531 667 ntBASIC1.13□□□□□ -2.23
CASP4P49662 RPL30P10-201ENST00000488148 337 ntBASIC1.13□□□□□ -2.23
CASP4P49662 HMGN1P7-201ENST00000491722 313 ntBASIC1.13□□□□□ -2.23
CASP4P49662 RNA5SP454-201ENST00000517231 127 ntBASIC1.13□□□□□ -2.23
CASP4P49662 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
CASP4P49662 AC022432.1-201ENST00000595739 310 ntBASIC1.13□□□□□ -2.23
CASP4P49662 AC080013.6-201ENST00000606185 215 ntBASIC1.13□□□□□ -2.23
CASP4P49662 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.13□□□□□ -2.23
CASP4P49662 U6.108-201ENST00000637764 58 ntBASIC1.13□□□□□ -2.23
CASP4P49662 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
CASP4P49662 RNY4P14-201ENST00000363656 96 ntBASIC1.12□□□□□ -2.23
CASP4P49662 RNU6-596P-201ENST00000365395 98 ntBASIC1.12□□□□□ -2.23
CASP4P49662 RNU6-793P-201ENST00000384233 104 ntBASIC1.12□□□□□ -2.23
CASP4P49662 RNA5SP118-201ENST00000410385 109 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AC009161.1-201ENST00000417306 376 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AC243428.1-201ENST00000421099 264 ntBASIC1.12□□□□□ -2.23
CASP4P49662 PGBD4P5-201ENST00000445958 426 ntBASIC1.12□□□□□ -2.23
CASP4P49662 RPS27P1-201ENST00000450552 247 ntBASIC1.12□□□□□ -2.23
CASP4P49662 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.12□□□□□ -2.23
CASP4P49662 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AC103851.1-201ENST00000506833 274 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AL929325.1-201ENST00000603096 117 ntBASIC1.12□□□□□ -2.23
CASP4P49662 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AC009248.2-201ENST00000619826 254 ntBASIC1.12□□□□□ -2.23
CASP4P49662 AC090617.10-201ENST00000624308 134 ntBASIC1.12□□□□□ -2.23
CASP4P49662 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CASP4P49662 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
CASP4P49662 SNORD87-201ENST00000364849 89 ntBASIC1.11□□□□□ -2.23
CASP4P49662 Y_RNA.415-201ENST00000384012 112 ntBASIC1.11□□□□□ -2.23
CASP4P49662 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
CASP4P49662 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CASP4P49662 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
CASP4P49662 DLGAP5P1-201ENST00000430307 464 ntBASIC1.11□□□□□ -2.23
CASP4P49662 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.11□□□□□ -2.23
CASP4P49662 AC091179.3-201ENST00000474761 144 ntBASIC1.11□□□□□ -2.23
CASP4P49662 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.11□□□□□ -2.23
CASP4P49662 RNU6-864P-201ENST00000516256 108 ntBASIC1.11□□□□□ -2.23
CASP4P49662 RN7SKP88-201ENST00000516847 250 ntBASIC1.11□□□□□ -2.23
CASP4P49662 MIR3942-201ENST00000585264 109 ntBASIC1.11□□□□□ -2.23
CASP4P49662 7SK.8-201ENST00000612110 250 ntBASIC1.11□□□□□ -2.23
CASP4P49662 AC021506.2-201ENST00000612354 169 ntBASIC1.11□□□□□ -2.23
CASP4P49662 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
CASP4P49662 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
CASP4P49662 AC099654.5-201ENST00000636479 350 ntBASIC1.11□□□□□ -2.23
CASP4P49662 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CASP4P49662 RNU6-623P-201ENST00000363143 105 ntBASIC1.1□□□□□ -2.23
CASP4P49662 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
CASP4P49662 Y_RNA.436-201ENST00000384097 102 ntBASIC1.1□□□□□ -2.23
CASP4P49662 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
CASP4P49662 RPL30P16-201ENST00000419341 429 ntBASIC1.1□□□□□ -2.23
CASP4P49662 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.1□□□□□ -2.23
CASP4P49662 AL606517.2-201ENST00000442855 241 ntBASIC1.1□□□□□ -2.23
CASP4P49662 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms