Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RPEP5-201ENST00000441137 268 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.84□□□□□ -2.11
NKX2-1P43699 RNU6-221P-201ENST00000459541 99 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 RPS27P21-201ENST00000486977 252 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 RN7SL636P-201ENST00000497504 294 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 RNU6-1143P-201ENST00000516125 104 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AC021269.2-201ENST00000532318 330 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AC018448.1-201ENST00000552843 316 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 MIR3169-201ENST00000578032 83 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 MIR4659A-201ENST00000580269 81 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AC005786.1-201ENST00000588553 154 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AC124312.5-201ENST00000604451 268 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 PRR13P7-201ENST00000605538 430 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AC116312.1-201ENST00000606841 314 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 AL357075.2-201ENST00000614906 189 ntBASIC1.84□□□□□ -2.11
NKX2-1P43699 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NKX2-1P43699 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NKX2-1P43699 RNU6-545P-201ENST00000362681 104 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 SNORD115-3-201ENST00000363100 82 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 Y_RNA.152-201ENST00000363578 100 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 Y_RNA.162-201ENST00000363683 102 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 Y_RNA.361-201ENST00000365515 120 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 Y_RNA.389-201ENST00000383924 113 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 RNU6-708P-201ENST00000384217 107 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 MIR548B-201ENST00000385247 97 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 MIR549A-201ENST00000385268 96 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
NKX2-1P43699 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-1P43699 AL353689.1-201ENST00000438895 199 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 AC108938.1-201ENST00000451204 136 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 SUMO1P2-201ENST00000452524 304 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 RNU6-856P-201ENST00000516959 98 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-1P43699 SNORD53-201ENST00000579969 78 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 MIR5007-201ENST00000583098 95 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.83□□□□□ -2.12
NKX2-1P43699 AC005828.6-201ENST00000606610 232 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 AC103810.6-201ENST00000606708 136 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 PART1_1.1-201ENST00000611761 217 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 AC040896.1-201ENST00000613819 479 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 AL078596.1-201ENST00000624856 447 ntBASIC1.83□□□□□ -2.12
NKX2-1P43699 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NKX2-1P43699 AL159152.1-201ENST00000635019 2587 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 Y_RNA.153-201ENST00000363615 91 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 RNA5SP68-201ENST00000363885 119 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 Y_RNA.415-201ENST00000384012 112 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 Y_RNA.439-201ENST00000384119 94 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 MIR548F4-201ENST00000408515 105 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 RNU5A-5P-201ENST00000411054 116 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 AL158823.1-201ENST00000418441 478 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 AC139712.2-201ENST00000424302 339 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 HMGN2P3-201ENST00000433603 273 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 HMGN2P5-201ENST00000436882 273 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 MTND5P22-201ENST00000458380 195 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 AC010531.2-201ENST00000465012 153 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 AC025465.3-201ENST00000510570 311 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 RNU6-1045P-201ENST00000516321 107 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 Y_RNA.720-201ENST00000517166 92 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.82□□□□□ -2.12
NKX2-1P43699 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 MIR6817-201ENST00000615588 66 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 AC006435.5-201ENST00000624486 112 ntBASIC1.82□□□□□ -2.12
NKX2-1P43699 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
NKX2-1P43699 RNU6-1305P-201ENST00000364353 104 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 Y_RNA.498-201ENST00000384460 102 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 MIR17-201ENST00000385012 84 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 UQCRBP2-201ENST00000447827 297 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 RPL23AP3-201ENST00000453844 468 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 RNA5SP233-201ENST00000459153 113 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 RNU7-57P-201ENST00000459540 60 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AP001486.1-201ENST00000463339 476 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AC079804.2-201ENST00000490376 200 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 SUMO2P18-201ENST00000518873 252 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-1P43699 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-1P43699 AL117187.1-201ENST00000555482 181 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AC005034.5-201ENST00000604219 466 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AL353149.1-201ENST00000610667 244 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AL590240.4-201ENST00000616908 390 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-1P43699 snoZ196.1-201ENST00000625269 89 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-1P43699 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-1P43699 ZNF72P-201ENST00000425869 1908 ntBASIC1.81□□□□□ -2.12
NKX2-1P43699 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-1P43699 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NKX2-1P43699 RNU6-626P-201ENST00000363354 107 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 RNU6-961P-201ENST00000363893 105 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 Y_RNA.243-201ENST00000364481 109 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 SNORA48.1-201ENST00000390879 135 ntBASIC1.8□□□□□ -2.12
NKX2-1P43699 SNORD115-46-201ENST00000390982 71 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms