Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNA5SP493-201ENST00000364115 91 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 SNORA63.7-201ENST00000365579 123 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 Y_RNA.471-201ENST00000384312 102 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 Y_RNA.551-201ENST00000384661 102 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 RNU6-823P-201ENST00000391042 103 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 RNA5SP508-201ENST00000411327 119 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 AC008134.1-201ENST00000420943 193 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 RAB28P5-201ENST00000427490 651 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 U8.20-201ENST00000459445 131 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.97□□□□□ -2.09
APOBEC1P41238 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.97□□□□□ -2.09
APOBEC1P41238 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.97□□□□□ -2.09
APOBEC1P41238 AC011476.5-201ENST00000615594 130 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 AC010205.1-201ENST00000616668 449 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 MIR3674-201ENST00000636576 68 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOBEC1P41238 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOBEC1P41238 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
APOBEC1P41238 MTND5P6-201ENST00000422338 1798 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 AL159152.1-201ENST00000635019 2587 ntBASIC1.97□□□□□ -2.09
APOBEC1P41238 Y_RNA.458-201ENST00000384240 102 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 MIR144-201ENST00000384886 86 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 RNU11-3P-201ENST00000391111 133 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 RNA5SP465-201ENST00000391195 109 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.96□□□□□ -2.1
APOBEC1P41238 BX510359.4-201ENST00000423750 193 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.96□□□□□ -2.1
APOBEC1P41238 SNORA59A-201ENST00000459326 152 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 MYL12BP1-201ENST00000569826 507 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 AC006504.6-201ENST00000590142 199 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 MIR6895-201ENST00000613497 78 ntBASIC1.96□□□□□ -2.1
APOBEC1P41238 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
APOBEC1P41238 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOBEC1P41238 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBEC1P41238 RNU6-1266P-201ENST00000362794 105 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 RNU6-961P-201ENST00000363893 105 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 Y_RNA.380-201ENST00000365663 111 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 Y_RNA.439-201ENST00000384119 94 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 Y_RNA.455-201ENST00000384230 98 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 RNA5SP425-201ENST00000410336 112 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 RPL26P26-201ENST00000480251 434 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 AC008413.1-201ENST00000511864 177 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 Y_RNA.715-201ENST00000517082 110 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.95□□□□□ -2.1
APOBEC1P41238 MIR3169-201ENST00000578032 83 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 MIR4680-201ENST00000580906 66 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 AL109918.3-201ENST00000603072 338 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 AC064859.1-201ENST00000624741 174 ntBASIC1.95□□□□□ -2.1
APOBEC1P41238 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBEC1P41238 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
APOBEC1P41238 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBEC1P41238 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
APOBEC1P41238 RNU6-626P-201ENST00000363354 107 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 RNU6-450P-201ENST00000364654 107 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 SNORA72.2-201ENST00000365028 127 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 Y_RNA.527-201ENST00000384573 102 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 MIR1252-201ENST00000408861 65 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 AL353689.1-201ENST00000438895 199 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 RPEP5-201ENST00000441137 268 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 IPO7P1-201ENST00000442031 636 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 RNU6-1146P-201ENST00000516282 102 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 AC025647.1-201ENST00000517879 253 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 SUMO2P18-201ENST00000518873 252 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 AP005660.1-201ENST00000522972 293 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 AC121758.2-201ENST00000553271 193 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 MIR3684-201ENST00000579779 74 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 AC005176.2-201ENST00000596933 147 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBEC1P41238 AC006001.4-201ENST00000622243 395 ntBASIC1.94□□□□□ -2.1
APOBEC1P41238 Y_RNA.230-201ENST00000364348 109 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 RNU6-1240P-201ENST00000365155 104 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 RNU6-20P-201ENST00000384106 107 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 AL079342.1-201ENST00000401460 267 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 RNU6-985P-201ENST00000410182 104 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 AC060773.1-201ENST00000421698 310 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
APOBEC1P41238 ATP5J2P3-201ENST00000451550 258 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
APOBEC1P41238 AC011406.1-201ENST00000512440 370 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 RNU6-764P-201ENST00000516396 105 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 IGLV3-17-201ENST00000519099 244 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
APOBEC1P41238 AC005786.1-201ENST00000588553 154 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 AC004467.1-201ENST00000615678 330 ntBASIC1.93□□□□□ -2.1
APOBEC1P41238 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
APOBEC1P41238 Y_RNA.152-201ENST00000363578 100 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 MIR597-201ENST00000384968 97 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
APOBEC1P41238 DPH3P2-201ENST00000422618 250 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms