Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RNU6-1013P-201ENST00000384180 107 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RNU6-842P-201ENST00000384269 107 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SHMT2P34897 RNU1-78P-201ENST00000391248 165 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RNA5SP467-201ENST00000391274 118 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RPL30P16-201ENST00000419341 429 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 MTND4LP16-201ENST00000440828 295 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AC245517.4-201ENST00000448601 281 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.21□□□□□ -2.22
SHMT2P34897 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RNU6-1053P-201ENST00000515930 101 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 RNU4-49P-201ENST00000516080 140 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AC024995.1-201ENST00000523014 93 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AC134698.4-201ENST00000523451 826 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AP003465.2-201ENST00000602571 373 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AC073413.2-201ENST00000604332 360 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 MIR8063-201ENST00000621930 81 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 U6.108-201ENST00000637764 58 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 ZNF299P-201ENST00000406845 1804 ntBASIC1.21□□□□□ -2.22
SHMT2P34897 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHMT2P34897 RNU6-727P-201ENST00000363592 107 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 U3.8-201ENST00000363675 217 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 RNU6-595P-201ENST00000363944 107 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 RNU6-331P-201ENST00000384724 107 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 MIR10B-201ENST00000385011 110 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHMT2P34897 AL356776.1-201ENST00000406574 447 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 MIR1253-201ENST00000408273 105 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 MIR1185-2-201ENST00000408687 86 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 USP9YP30-201ENST00000430729 455 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 NDUFB4P10-201ENST00000452541 359 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.2□□□□□ -2.22
SHMT2P34897 AP000870.1-201ENST00000472927 406 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 AC092989.1-201ENST00000481235 277 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.2□□□□□ -2.22
SHMT2P34897 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.2□□□□□ -2.22
SHMT2P34897 AC011352.1-201ENST00000512300 793 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 RNU6-718P-201ENST00000516166 105 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.2□□□□□ -2.22
SHMT2P34897 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.2□□□□□ -2.22
SHMT2P34897 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
SHMT2P34897 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SHMT2P34897 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU6-1240P-201ENST00000365155 104 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 Y_RNA.405-201ENST00000383979 100 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 Y_RNA.451-201ENST00000384200 100 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU6-793P-201ENST00000384233 104 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 Y_RNA.490-201ENST00000384413 102 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 Y_RNA.524-201ENST00000384564 100 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 Y_RNA.561-201ENST00000384694 100 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU6-541P-201ENST00000384709 110 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 MIR1277-201ENST00000408536 78 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 AL606517.2-201ENST00000442855 241 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.19□□□□□ -2.22
SHMT2P34897 SNORD5.1-201ENST00000458800 75 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 MTND5P5-201ENST00000503764 376 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU1-54P-201ENST00000517181 120 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 RNU7-128P-201ENST00000517247 62 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.19□□□□□ -2.22
SHMT2P34897 AL590705.4-201ENST00000532209 134 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 MIR4273-201ENST00000582824 84 ntBASIC1.19□□□□□ -2.22
SHMT2P34897 Y_RNA.6-201ENST00000362350 114 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 RNU6-280P-201ENST00000364145 104 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 RNA5SP109-201ENST00000391010 116 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 MTND3P23-201ENST00000431980 347 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 RPS26P45-201ENST00000471748 340 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 AC099513.1-201ENST00000490423 301 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 AL163195.1-201ENST00000496941 348 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.18□□□□□ -2.22
SHMT2P34897 TRMT112P2-201ENST00000512910 132 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 AC093303.1-201ENST00000514549 295 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 MIR4709-201ENST00000577272 72 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 MIR4790-201ENST00000577799 79 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 AC018638.8-201ENST00000588755 281 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 MIR6128-201ENST00000615528 109 ntBASIC1.18□□□□□ -2.22
SHMT2P34897 RNU6-222P-201ENST00000362438 107 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 RNY1P10-201ENST00000363268 113 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 RNA5SP323-201ENST00000391094 133 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 RPL21P1-201ENST00000399532 476 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 COX6CP10-201ENST00000416832 224 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 AL139396.1-201ENST00000421137 167 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 MTND1P34-201ENST00000438556 671 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 RNU7-34P-201ENST00000459394 64 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 RNU6-329P-201ENST00000459618 107 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 AC005840.1-201ENST00000498412 377 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 HMGN1P12-201ENST00000499125 195 ntBASIC1.17□□□□□ -2.22
SHMT2P34897 RNU7-175P-201ENST00000515915 61 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms