Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR4300-201ENST00000581016 96 ntBASIC2.45□□□□□ -2.02
CIITAP33076 AC245884.12-201ENST00000615364 59 ntBASIC2.45□□□□□ -2.02
CIITAP33076 AC005562.2-201ENST00000618264 111 ntBASIC2.45□□□□□ -2.02
CIITAP33076 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
CIITAP33076 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CIITAP33076 MTND5P35-201ENST00000557537 1720 ntBASIC2.45□□□□□ -2.02
CIITAP33076 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CIITAP33076 RNU1-62P-201ENST00000362599 164 ntBASIC2.44□□□□□ -2.02
CIITAP33076 Y_RNA.179-201ENST00000363844 90 ntBASIC2.44□□□□□ -2.02
CIITAP33076 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
CIITAP33076 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CIITAP33076 AC004386.2-201ENST00000441858 148 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AC007395.1-201ENST00000451333 677 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.44□□□□□ -2.02
CIITAP33076 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.44□□□□□ -2.02
CIITAP33076 SNORA40.15-201ENST00000516884 107 ntBASIC2.44□□□□□ -2.02
CIITAP33076 HSPE1P18-201ENST00000517602 280 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.44□□□□□ -2.02
CIITAP33076 AP003733.2-201ENST00000529409 171 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AC055872.1-201ENST00000570978 278 ntBASIC2.44□□□□□ -2.02
CIITAP33076 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.44□□□□□ -2.02
CIITAP33076 MIR4648-201ENST00000580107 72 ntBASIC2.44□□□□□ -2.02
CIITAP33076 MIR4423-201ENST00000580922 80 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AC078899.2-201ENST00000595282 212 ntBASIC2.44□□□□□ -2.02
CIITAP33076 SNRPGP20-201ENST00000604477 205 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.44□□□□□ -2.02
CIITAP33076 TCL6_2.1-201ENST00000615162 119 ntBASIC2.44□□□□□ -2.02
CIITAP33076 MIR6873-201ENST00000622788 63 ntBASIC2.44□□□□□ -2.02
CIITAP33076 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.44□□□□□ -2.02
CIITAP33076 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.44□□□□□ -2.02
CIITAP33076 RNU6-793P-201ENST00000384233 104 ntBASIC2.43□□□□□ -2.02
CIITAP33076 RNU6-937P-201ENST00000384325 106 ntBASIC2.43□□□□□ -2.02
CIITAP33076 Y_RNA.483-201ENST00000384380 101 ntBASIC2.43□□□□□ -2.02
CIITAP33076 MIR29B2-201ENST00000385055 81 ntBASIC2.43□□□□□ -2.02
CIITAP33076 MIR504-201ENST00000385065 83 ntBASIC2.43□□□□□ -2.02
CIITAP33076 IFNA11P-201ENST00000446352 526 ntBASIC2.43□□□□□ -2.02
CIITAP33076 PCNPP5-201ENST00000452246 481 ntBASIC2.43□□□□□ -2.02
CIITAP33076 RPS29P21-201ENST00000496272 170 ntBASIC2.43□□□□□ -2.02
CIITAP33076 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.43□□□□□ -2.02
CIITAP33076 MIR449C-201ENST00000516047 92 ntBASIC2.43□□□□□ -2.02
CIITAP33076 Y_RNA.683-201ENST00000516508 93 ntBASIC2.43□□□□□ -2.02
CIITAP33076 RNU2-44P-201ENST00000516795 194 ntBASIC2.43□□□□□ -2.02
CIITAP33076 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.43□□□□□ -2.02
CIITAP33076 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
CIITAP33076 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.43□□□□□ -2.02
CIITAP33076 AP002001.1-203ENST00000534002 267 ntBASIC2.43□□□□□ -2.02
CIITAP33076 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.43□□□□□ -2.02
CIITAP33076 AC004817.2-201ENST00000561794 651 ntBASIC2.43□□□□□ -2.02
CIITAP33076 AC233702.2-202ENST00000562547 291 ntBASIC2.43□□□□□ -2.02
CIITAP33076 MIR5002-201ENST00000584713 97 ntBASIC2.43□□□□□ -2.02
CIITAP33076 Y_RNA.772-201ENST00000606692 102 ntBASIC2.43□□□□□ -2.02
CIITAP33076 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.43□□□□□ -2.02
CIITAP33076 AC090517.3-201ENST00000625170 141 ntBASIC2.43□□□□□ -2.02
CIITAP33076 LINC02555-201ENST00000563933 1951 ntBASIC2.43□□□□□ -2.02
CIITAP33076 U8.2-201ENST00000363156 134 ntBASIC2.42□□□□□ -2.02
CIITAP33076 RNU6-727P-201ENST00000363592 107 ntBASIC2.42□□□□□ -2.02
CIITAP33076 Y_RNA.518-201ENST00000384552 113 ntBASIC2.42□□□□□ -2.02
CIITAP33076 SNORA64-201ENST00000384674 134 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
CIITAP33076 Y_RNA.595-201ENST00000410403 105 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.42□□□□□ -2.02
CIITAP33076 AC005002.2-201ENST00000438228 269 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
CIITAP33076 RNU6-408P-201ENST00000515910 100 ntBASIC2.42□□□□□ -2.02
CIITAP33076 RNU6-1143P-201ENST00000516125 104 ntBASIC2.42□□□□□ -2.02
CIITAP33076 RNU6-966P-201ENST00000516479 104 ntBASIC2.42□□□□□ -2.02
CIITAP33076 RNU6-344P-201ENST00000516635 111 ntBASIC2.42□□□□□ -2.02
CIITAP33076 RNU6-1098P-201ENST00000516772 96 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AC018630.3-201ENST00000542637 96 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AC026470.2-201ENST00000561492 181 ntBASIC2.42□□□□□ -2.02
CIITAP33076 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.42□□□□□ -2.02
CIITAP33076 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.42□□□□□ -2.02
CIITAP33076 MIR3126-201ENST00000577443 74 ntBASIC2.42□□□□□ -2.02
CIITAP33076 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
CIITAP33076 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.42□□□□□ -2.02
CIITAP33076 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.42□□□□□ -2.02
CIITAP33076 MIR7843-201ENST00000622274 79 ntBASIC2.42□□□□□ -2.02
CIITAP33076 MIR219B-201ENST00000637023 88 ntBASIC2.42□□□□□ -2.02
CIITAP33076 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.42□□□□□ -2.02
CIITAP33076 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.41□□□□□ -2.02
CIITAP33076 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CIITAP33076 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.41□□□□□ -2.02
CIITAP33076 Y_RNA.84-201ENST00000363011 104 ntBASIC2.41□□□□□ -2.02
CIITAP33076 Y_RNA.415-201ENST00000384012 112 ntBASIC2.41□□□□□ -2.02
CIITAP33076 RNU6-20P-201ENST00000384106 107 ntBASIC2.41□□□□□ -2.02
CIITAP33076 SNORD63-201ENST00000384262 68 ntBASIC2.41□□□□□ -2.02
CIITAP33076 RNU6-102P-201ENST00000384485 104 ntBASIC2.41□□□□□ -2.02
CIITAP33076 MIR1302-3-201ENST00000408128 138 ntBASIC2.41□□□□□ -2.02
CIITAP33076 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
CIITAP33076 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
CIITAP33076 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.41□□□□□ -2.02
CIITAP33076 AC009237.7-201ENST00000447357 229 ntBASIC2.41□□□□□ -2.02
CIITAP33076 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
CIITAP33076 CYCSP26-201ENST00000534107 320 ntBASIC2.41□□□□□ -2.02
CIITAP33076 AC018448.1-201ENST00000552843 316 ntBASIC2.41□□□□□ -2.02
CIITAP33076 MIR5006-201ENST00000583027 110 ntBASIC2.41□□□□□ -2.02
CIITAP33076 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CIITAP33076 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CIITAP33076 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms