Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC010525.2-201ENST00000590920 195 ntBASIC-1.78□□□□□ -2.69
CPS1P31327 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RNU6-650P-201ENST00000365658 111 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 MIR1185-2-201ENST00000408687 86 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.79□□□□□ -2.7
CPS1P31327 snoU13.8-201ENST00000458890 104 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RPS29P27-201ENST00000463711 170 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RNU6-504P-201ENST00000516568 104 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RNU6-706P-201ENST00000517229 104 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 MIR4752-201ENST00000579672 72 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 MIR4306-201ENST00000583390 91 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RPL17P51-201ENST00000605218 238 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 AC020891.4-201ENST00000605745 93 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.79□□□□□ -2.7
CPS1P31327 RNA5SP48-201ENST00000363969 126 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 RNU6-116P-201ENST00000384042 109 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 MIR1298-201ENST00000408783 112 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 MTCO2P5-201ENST00000422621 426 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 AL512326.2-201ENST00000426359 151 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 COX7BP2-201ENST00000437976 242 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.8□□□□□ -2.7
CPS1P31327 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.8□□□□□ -2.7
CPS1P31327 AC008608.1-201ENST00000603910 127 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 AL136221.1-201ENST00000621449 509 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.8□□□□□ -2.7
CPS1P31327 MTND4P9-201ENST00000507819 1346 ntBASIC-1.8□□□□□ -2.7
CPS1P31327 SNORD115-2-201ENST00000362842 82 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 SNORD56.1-201ENST00000362913 68 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 RNU4-36P-201ENST00000364294 144 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 MIR16-1-201ENST00000385271 89 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 MTND3P20-201ENST00000407663 186 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 RPS3AP3-201ENST00000411933 242 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AC015818.7-201ENST00000428754 109 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AC087499.7-201ENST00000441958 109 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 RNA5SP169-201ENST00000517268 117 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.81□□□□□ -2.7
CPS1P31327 AC006441.5-201ENST00000612680 209 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AC091304.10-201ENST00000641554 121 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 MIR520C-201ENST00000385005 87 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AL365184.2-201ENST00000431139 435 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 MTCYBP39-201ENST00000437562 491 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AC026410.2-201ENST00000460281 156 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 RNU6-948P-201ENST00000516374 107 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.81□□□□□ -2.7
CPS1P31327 AC110760.3-201ENST00000598794 467 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 AC012507.3-201ENST00000603556 477 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 uc_338.19-201ENST00000616808 99 ntBASIC-1.81□□□□□ -2.7
CPS1P31327 SNORD114-25-201ENST00000363742 72 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 RNY4P7-201ENST00000364600 96 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 AL133264.1-201ENST00000407157 562 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.82□□□□□ -2.7
CPS1P31327 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.82□□□□□ -2.7
CPS1P31327 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.82□□□□□ -2.7
CPS1P31327 AL133396.1-201ENST00000432048 687 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.82□□□□□ -2.7
CPS1P31327 AC138749.4-201ENST00000563970 127 ntBASIC-1.82□□□□□ -2.7
CPS1P31327 RNU6-1285P-201ENST00000363480 105 ntBASIC-1.83□□□□□ -2.7
CPS1P31327 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.83□□□□□ -2.7
CPS1P31327 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.83□□□□□ -2.7
CPS1P31327 AL929288.2-201ENST00000446368 407 ntBASIC-1.83□□□□□ -2.7
CPS1P31327 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.83□□□□□ -2.7
CPS1P31327 MIR4499-201ENST00000584834 69 ntBASIC-1.83□□□□□ -2.7
CPS1P31327 RNU4-56P-201ENST00000364700 142 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 RNU6-47P-201ENST00000383866 107 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 MIR1253-201ENST00000408273 105 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 AL117339.3-201ENST00000418733 162 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 AC005002.2-201ENST00000438228 269 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 AL360271.2-201ENST00000447710 161 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 MIR2115-201ENST00000516657 100 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.84□□□□□ -2.7
CPS1P31327 AC093726.3-201ENST00000637588 150 ntBASIC-1.84□□□□□ -2.7
CPS1P31327 AL355143.1-201ENST00000407101 841 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 SUMO1P3-201ENST00000439961 304 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 RNU6-469P-201ENST00000516253 101 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 RNU6-714P-201ENST00000516963 103 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 MIR7844-201ENST00000616161 122 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 AC134878.1-201ENST00000619901 243 ntBASIC-1.85□□□□□ -2.71
CPS1P31327 RNU6-545P-201ENST00000362681 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-447P-201ENST00000410293 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-355P-201ENST00000410427 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-791P-201ENST00000410467 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-705P-201ENST00000410601 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-860P-201ENST00000410860 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 RNU6-785P-201ENST00000411324 104 ntBASIC-1.86□□□□□ -2.71
CPS1P31327 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms