Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNU6-256P-201ENST00000516747 97 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 RNU6-165P-201ENST00000517170 99 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DMAP28067 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.83□□□□□ -2.28
HLA-DMAP28067 MIR3664-201ENST00000579074 99 ntBASIC0.83□□□□□ -2.28
HLA-DMAP28067 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.83□□□□□ -2.28
HLA-DMAP28067 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
HLA-DMAP28067 MIR378A-201ENST00000362177 66 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 Y_RNA.100-201ENST00000363141 102 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNY3P3-201ENST00000363816 102 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 Y_RNA.212-201ENST00000364177 102 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU6-128P-201ENST00000383976 107 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 Y_RNA.517-201ENST00000384551 106 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU6-306P-201ENST00000384617 107 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU6-1031P-201ENST00000384773 107 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU6-482P-201ENST00000391068 107 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 MIR1185-2-201ENST00000408687 86 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DMAP28067 MTND2P22-201ENST00000444325 1033 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.82□□□□□ -2.28
HLA-DMAP28067 AC091179.3-201ENST00000474761 144 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU6-1146P-201ENST00000516282 102 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU6-314P-201ENST00000516574 104 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 RNU1-142P-201ENST00000516682 145 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 POLR3GP2-201ENST00000588366 668 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 AL020996.3-201ENST00000606617 222 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 AC040896.1-201ENST00000613819 479 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 MIR8054-201ENST00000620877 86 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.82□□□□□ -2.28
HLA-DMAP28067 AC068647.2-201ENST00000637380 353 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 MIR1321-201ENST00000637766 79 ntBASIC0.82□□□□□ -2.28
HLA-DMAP28067 Y_RNA.135-201ENST00000363439 95 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU6-1059P-201ENST00000363752 98 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 Y_RNA.194-201ENST00000363985 102 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU4-9P-201ENST00000364951 139 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 SNORA72.2-201ENST00000365028 127 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 Y_RNA.319-201ENST00000365138 92 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 SNORD116-11-201ENST00000383882 92 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 Y_RNA.533-201ENST00000384596 114 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 Y_RNA.554-201ENST00000384672 102 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 Y_RNA.559-201ENST00000384686 107 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU6-440P-201ENST00000390882 105 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HLA-DMAP28067 MTND1P1-201ENST00000445453 368 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU6-1088P-201ENST00000516850 104 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNU6-273P-201ENST00000516937 96 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 RNA5SP54-201ENST00000516951 92 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AC027419.1-201ENST00000522976 328 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.81□□□□□ -2.28
HLA-DMAP28067 MIR5695-201ENST00000579717 85 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 SNORD11B-201ENST00000607707 90 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AC019193.3-201ENST00000609144 554 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AL021879.1-201ENST00000611756 288 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AC106754.2-201ENST00000623006 233 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AC090617.10-201ENST00000624308 134 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 AC018630.2-201ENST00000534866 2403 ntBASIC0.81□□□□□ -2.28
HLA-DMAP28067 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HLA-DMAP28067 Y_RNA.48-201ENST00000362710 103 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DMAP28067 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HLA-DMAP28067 RNU6-159P-201ENST00000391080 106 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC016907.1-201ENST00000419483 435 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 ZNF885P-201ENST00000420174 1098 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.8□□□□□ -2.28
HLA-DMAP28067 SNORD65B-201ENST00000459126 73 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 TRBVA-201ENST00000498804 316 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC091144.1-201ENST00000519573 138 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC024995.1-201ENST00000523014 93 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC245505.1-201ENST00000556398 224 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.8□□□□□ -2.28
HLA-DMAP28067 MIR5696-201ENST00000578474 85 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 MIR4298-201ENST00000584380 73 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 NBR2-204ENST00000587322 63 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AL359075.3-201ENST00000613288 217 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 U6.73-201ENST00000619194 103 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AL359697.1-201ENST00000624879 587 ntBASIC0.8□□□□□ -2.28
HLA-DMAP28067 AL391987.6-201ENST00000305671 199 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 SNORD115-32-201ENST00000364079 82 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 Y_RNA.414-201ENST00000384011 101 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 RNU6-245P-201ENST00000384020 107 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 RNU6-17P-201ENST00000384245 107 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 RNU6-18P-201ENST00000384527 107 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HLA-DMAP28067 MTATP6P13-201ENST00000438531 667 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 AP000870.1-201ENST00000472927 406 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 AC092991.1-201ENST00000477176 376 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 AL163540.1-201ENST00000485382 386 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 RNU6-506P-201ENST00000516553 94 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.79□□□□□ -2.28
HLA-DMAP28067 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.79□□□□□ -2.28
HLA-DMAP28067 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.79□□□□□ -2.28
HLA-DMAP28067 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 735.1 ms