Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 RNU1-48P-201ENST00000516400 162 ntBASIC1.56□□□□□ -2.16
ACKR3P25106 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ACKR3P25106 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
ACKR3P25106 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
ACKR3P25106 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.56□□□□□ -2.16
ACKR3P25106 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ACKR3P25106 RNA5SP361-201ENST00000362686 118 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 RNU6-879P-201ENST00000364328 108 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 RNU6-890P-201ENST00000384121 107 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 RNU6-1297P-201ENST00000384415 104 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 MIR329-1-201ENST00000385028 80 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 AC019129.1-201ENST00000403786 261 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 RPS20P15-201ENST00000412792 311 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 AC027575.1-201ENST00000481064 460 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 AC022493.2-201ENST00000506122 481 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 RNU6-107P-201ENST00000516643 102 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 RNA5SP437-201ENST00000517249 129 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 AC022868.1-201ENST00000517767 391 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 AC091144.1-201ENST00000519573 138 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 FRG2DP-202ENST00000566967 323 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 MIR548S-201ENST00000581352 82 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 MIR3945-201ENST00000581853 98 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 AL132765.2-201ENST00000610812 351 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
ACKR3P25106 MIR1302-1-201ENST00000637932 143 ntBASIC1.55□□□□□ -2.16
ACKR3P25106 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
ACKR3P25106 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 RNU6-661P-201ENST00000362409 107 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 SNORA72.2-201ENST00000365028 127 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
ACKR3P25106 Y_RNA.387-201ENST00000383918 102 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 MIR515-2-201ENST00000384883 83 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 MIR515-1-201ENST00000384884 83 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 Y_RNA.595-201ENST00000410403 105 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 RNU2-7P-201ENST00000410794 178 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 EBAG9P1-201ENST00000418955 543 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.54□□□□□ -2.16
ACKR3P25106 MTCO3P10-201ENST00000455912 772 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 RPL30P15-201ENST00000457129 321 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 Y_RNA.653-201ENST00000459091 95 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 MIR2053-201ENST00000459295 91 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.54□□□□□ -2.16
ACKR3P25106 AC107393.1-201ENST00000512403 346 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 RNU6-875P-201ENST00000516488 106 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 RNU6-264P-201ENST00000517134 104 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 SUB1P3-201ENST00000564581 315 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 AC024614.2-201ENST00000577584 372 ntBASIC1.54□□□□□ -2.16
ACKR3P25106 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ACKR3P25106 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
ACKR3P25106 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
ACKR3P25106 RNU6-1266P-201ENST00000362794 105 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 SNORA63D-201ENST00000364359 132 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 RNU6-1145P-201ENST00000384246 107 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 Y_RNA.577-201ENST00000384794 101 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 RNA5SP467-201ENST00000391274 118 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 MTCYBP4-201ENST00000401524 249 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.53□□□□□ -2.16
ACKR3P25106 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.53□□□□□ -2.16
ACKR3P25106 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.53□□□□□ -2.16
ACKR3P25106 TOMM22P2-201ENST00000430735 237 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 AC069257.2-201ENST00000441819 155 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.53□□□□□ -2.16
ACKR3P25106 UQCRBP2-201ENST00000447827 297 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.53□□□□□ -2.16
ACKR3P25106 HMGN2P23-201ENST00000456759 269 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.53□□□□□ -2.16
ACKR3P25106 CYCSP23-201ENST00000519781 313 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 AC025253.1-201ENST00000613623 543 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 AL357075.2-201ENST00000614906 189 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 MTND4LP32-201ENST00000636111 270 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.53□□□□□ -2.16
ACKR3P25106 SNORD114-1-201ENST00000362705 72 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 Y_RNA.259-201ENST00000364619 101 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 Y_RNA.384-201ENST00000383909 102 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 MIR30A-201ENST00000385092 71 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 RNU6-1156P-201ENST00000410365 100 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.52□□□□□ -2.17
ACKR3P25106 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 UBL5P3-201ENST00000475112 231 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 HMGN1P13-201ENST00000505795 138 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 AC025465.3-201ENST00000510570 311 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 RNU6-470P-201ENST00000515954 104 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 AC104984.5-201ENST00000586878 94 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.52□□□□□ -2.17
ACKR3P25106 AC133104.2-201ENST00000615272 193 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 AC104260.1-201ENST00000616660 539 ntBASIC1.52□□□□□ -2.17
ACKR3P25106 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.52□□□□□ -2.17
ACKR3P25106 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
ACKR3P25106 RNU6-318P-201ENST00000384283 103 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 SNORD116-29-201ENST00000384516 83 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 MIR625-201ENST00000385047 85 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
ACKR3P25106 RNU6-1009P-201ENST00000390996 107 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 RNA5SP323-201ENST00000391094 133 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 RNY4P36-201ENST00000391116 96 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 ELOCP21-201ENST00000412558 336 ntBASIC1.51□□□□□ -2.17
ACKR3P25106 AC114482.1-201ENST00000418010 247 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms