Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC091179.3-201ENST00000474761 144 ntBASIC1.66□□□□□ -2.14
BDNFP23560 RNU6-1114P-201ENST00000516022 107 ntBASIC1.66□□□□□ -2.14
BDNFP23560 Y_RNA.683-201ENST00000516508 93 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AL442163.3-201ENST00000554110 156 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AL121579.1-201ENST00000555129 305 ntBASIC1.66□□□□□ -2.14
BDNFP23560 TPRKBP2-201ENST00000565969 475 ntBASIC1.66□□□□□ -2.14
BDNFP23560 MIR3942-201ENST00000585264 109 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AL929325.1-201ENST00000603096 117 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
BDNFP23560 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.66□□□□□ -2.14
BDNFP23560 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
BDNFP23560 MIR26B-201ENST00000362251 77 ntBASIC1.65□□□□□ -2.15
BDNFP23560 RNU6-595P-201ENST00000363944 107 ntBASIC1.65□□□□□ -2.15
BDNFP23560 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
BDNFP23560 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
BDNFP23560 MIR562-201ENST00000384894 95 ntBASIC1.65□□□□□ -2.15
BDNFP23560 AC016907.1-201ENST00000419483 435 ntBASIC1.65□□□□□ -2.15
BDNFP23560 USP9YP16-201ENST00000430287 407 ntBASIC1.65□□□□□ -2.15
BDNFP23560 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.65□□□□□ -2.15
BDNFP23560 USP9YP23-201ENST00000455085 407 ntBASIC1.65□□□□□ -2.15
BDNFP23560 FO393415.2-201ENST00000480085 343 ntBASIC1.65□□□□□ -2.15
BDNFP23560 MTCYBP18-201ENST00000501056 747 ntBASIC1.65□□□□□ -2.15
BDNFP23560 RNU6-566P-201ENST00000516790 107 ntBASIC1.65□□□□□ -2.15
BDNFP23560 RNU6-273P-201ENST00000516937 96 ntBASIC1.65□□□□□ -2.15
BDNFP23560 BX248123.2-201ENST00000606318 124 ntBASIC1.65□□□□□ -2.15
BDNFP23560 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
BDNFP23560 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
BDNFP23560 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.64□□□□□ -2.15
BDNFP23560 MIR150-201ENST00000385048 84 ntBASIC1.64□□□□□ -2.15
BDNFP23560 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
BDNFP23560 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.64□□□□□ -2.15
BDNFP23560 MTND1P34-201ENST00000438556 671 ntBASIC1.64□□□□□ -2.15
BDNFP23560 MTND4P18-201ENST00000447010 465 ntBASIC1.64□□□□□ -2.15
BDNFP23560 AC090617.3-201ENST00000573670 475 ntBASIC1.64□□□□□ -2.15
BDNFP23560 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.64□□□□□ -2.15
BDNFP23560 Y_RNA.405-201ENST00000383979 100 ntBASIC1.63□□□□□ -2.15
BDNFP23560 Y_RNA.451-201ENST00000384200 100 ntBASIC1.63□□□□□ -2.15
BDNFP23560 Y_RNA.524-201ENST00000384564 100 ntBASIC1.63□□□□□ -2.15
BDNFP23560 Y_RNA.533-201ENST00000384596 114 ntBASIC1.63□□□□□ -2.15
BDNFP23560 Y_RNA.561-201ENST00000384694 100 ntBASIC1.63□□□□□ -2.15
BDNFP23560 RNU1-139P-201ENST00000391307 165 ntBASIC1.63□□□□□ -2.15
BDNFP23560 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AP000870.1-201ENST00000472927 406 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.63□□□□□ -2.15
BDNFP23560 RNU6-107P-201ENST00000516643 102 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AL512310.8-201ENST00000550183 120 ntBASIC1.63□□□□□ -2.15
BDNFP23560 UBL5P4-201ENST00000562584 236 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
BDNFP23560 MIR5695-201ENST00000579717 85 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AL365434.2-201ENST00000607979 234 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
BDNFP23560 MIR8054-201ENST00000620877 86 ntBASIC1.63□□□□□ -2.15
BDNFP23560 AC099654.5-201ENST00000636479 350 ntBASIC1.63□□□□□ -2.15
BDNFP23560 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
BDNFP23560 MIR10B-201ENST00000385011 110 ntBASIC1.62□□□□□ -2.15
BDNFP23560 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
BDNFP23560 RNU6-510P-201ENST00000391239 108 ntBASIC1.62□□□□□ -2.15
BDNFP23560 SDAD1P3-201ENST00000427380 333 ntBASIC1.62□□□□□ -2.15
BDNFP23560 UBE2V1P7-201ENST00000446395 340 ntBASIC1.62□□□□□ -2.15
BDNFP23560 MTND1P17-201ENST00000448961 204 ntBASIC1.62□□□□□ -2.15
BDNFP23560 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.62□□□□□ -2.15
BDNFP23560 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.62□□□□□ -2.15
BDNFP23560 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.62□□□□□ -2.15
BDNFP23560 RN7SKP88-201ENST00000516847 250 ntBASIC1.62□□□□□ -2.15
BDNFP23560 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
BDNFP23560 MIR4790-201ENST00000577799 79 ntBASIC1.62□□□□□ -2.15
BDNFP23560 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.62□□□□□ -2.15
BDNFP23560 MIR4742-201ENST00000581069 85 ntBASIC1.62□□□□□ -2.15
BDNFP23560 7SK.8-201ENST00000612110 250 ntBASIC1.62□□□□□ -2.15
BDNFP23560 7SK.11-201ENST00000615477 250 ntBASIC1.62□□□□□ -2.15
BDNFP23560 MIR6128-201ENST00000615528 109 ntBASIC1.62□□□□□ -2.15
BDNFP23560 AL513423.1-201ENST00000621695 132 ntBASIC1.62□□□□□ -2.15
BDNFP23560 7SK.13-201ENST00000622040 250 ntBASIC1.62□□□□□ -2.15
BDNFP23560 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
BDNFP23560 MIR378A-201ENST00000362177 66 ntBASIC1.61□□□□□ -2.15
BDNFP23560 RNU6-593P-201ENST00000364716 112 ntBASIC1.61□□□□□ -2.15
BDNFP23560 RNU6-939P-201ENST00000384634 107 ntBASIC1.61□□□□□ -2.15
BDNFP23560 Y_RNA.554-201ENST00000384672 102 ntBASIC1.61□□□□□ -2.15
BDNFP23560 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
BDNFP23560 RPL37P10-201ENST00000412884 288 ntBASIC1.61□□□□□ -2.15
BDNFP23560 AC010154.1-201ENST00000425857 269 ntBASIC1.61□□□□□ -2.15
BDNFP23560 RPS27P1-201ENST00000450552 247 ntBASIC1.61□□□□□ -2.15
BDNFP23560 AC010598.1-201ENST00000510378 103 ntBASIC1.61□□□□□ -2.15
BDNFP23560 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.61□□□□□ -2.15
BDNFP23560 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.61□□□□□ -2.15
BDNFP23560 AP003033.1-201ENST00000527244 415 ntBASIC1.61□□□□□ -2.15
BDNFP23560 AC019288.1-201ENST00000557918 224 ntBASIC1.61□□□□□ -2.15
BDNFP23560 MIR4438-201ENST00000585271 93 ntBASIC1.61□□□□□ -2.15
BDNFP23560 U6.108-201ENST00000637764 58 ntBASIC1.61□□□□□ -2.15
BDNFP23560 RNU6-831P-201ENST00000384548 107 ntBASIC1.6□□□□□ -2.15
BDNFP23560 RNU6-440P-201ENST00000390882 105 ntBASIC1.6□□□□□ -2.15
BDNFP23560 RNU6-700P-201ENST00000391043 107 ntBASIC1.6□□□□□ -2.15
BDNFP23560 MTCYBP4-201ENST00000401524 249 ntBASIC1.6□□□□□ -2.15
BDNFP23560 AL356776.1-201ENST00000406574 447 ntBASIC1.6□□□□□ -2.15
BDNFP23560 Y_RNA.595-201ENST00000410403 105 ntBASIC1.6□□□□□ -2.15
BDNFP23560 SNORD5.1-201ENST00000458800 75 ntBASIC1.6□□□□□ -2.15
BDNFP23560 RPL21P9-201ENST00000556149 474 ntBASIC1.6□□□□□ -2.15
BDNFP23560 AL160236.1-201ENST00000556317 195 ntBASIC1.6□□□□□ -2.15
BDNFP23560 AC022217.4-201ENST00000604389 163 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms