Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
RAB40ALP0C0E4 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 RNU1-96P-201ENST00000364163 162 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.577-201ENST00000384794 101 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 MIR625-201ENST00000385047 85 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 MIR1253-201ENST00000408273 105 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 CYCSP49-201ENST00000420810 319 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 AC008134.1-201ENST00000420943 193 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 AC099677.2-201ENST00000436385 175 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 MTATP6P23-201ENST00000440153 476 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 RNU6-221P-201ENST00000459541 99 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 RNU6-470P-201ENST00000515954 104 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 RNU6-107P-201ENST00000516643 102 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.718-201ENST00000517110 102 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 AC022868.1-201ENST00000517767 391 ntBASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
RAB40ALP0C0E4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 RNU6-1156P-201ENST00000410365 100 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP100-201ENST00000410903 110 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP59-201ENST00000410922 110 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AC114482.1-201ENST00000418010 247 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 MTCO2P27-201ENST00000420740 428 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 HMGN2P34-201ENST00000437647 269 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 ELOCP24-201ENST00000456370 334 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 U8.22-201ENST00000459141 133 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 Y_RNA.632-201ENST00000459189 102 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP458-201ENST00000516188 119 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AK6P2-201ENST00000549020 471 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 SUB1P4-201ENST00000566062 339 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AL353149.1-201ENST00000610667 244 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AC084781.2-201ENST00000615568 161 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 AC126177.8-201ENST00000618339 1015 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.78□□□□□ -2.12
RAB40ALP0C0E4 RNA5SP361-201ENST00000362686 118 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 MIR329-1-201ENST00000385028 80 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 SNORA69.1-201ENST00000390904 137 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 MIR1185-2-201ENST00000408687 86 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 AC009310.1-201ENST00000414414 451 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 UQCRBP2-201ENST00000447827 297 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 AC025647.1-201ENST00000517879 253 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 MIR4713-201ENST00000582691 75 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 MIR338-201ENST00000636369 67 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 AC112487.2-201ENST00000637950 304 ntBASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
RAB40ALP0C0E4 AC073544.1-201ENST00000600110 1595 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 RNU1-17P-201ENST00000363022 152 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AL117342.1-201ENST00000404861 406 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 CST2P1-201ENST00000425770 87 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC236972.2-201ENST00000434979 310 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC010409.1-201ENST00000487382 476 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC105758.1-201ENST00000506038 399 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 RNU7-4P-201ENST00000516961 62 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC091144.1-201ENST00000519573 138 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 CYCSP23-201ENST00000519781 313 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC093027.1-201ENST00000546698 429 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC022254.1-201ENST00000567857 235 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 AC080078.3-201ENST00000605407 463 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
RAB40ALP0C0E4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 RNU6-417P-201ENST00000384712 107 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 AC016909.1-201ENST00000415916 166 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 SNORD19B-201ENST00000459623 84 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 RPL23AP63-201ENST00000498752 471 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 MTND3P22-201ENST00000510932 243 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 SNORA31.17-201ENST00000516953 127 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 MIR2355-201ENST00000517199 87 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 MIR3683-201ENST00000580847 82 ntBASIC1.75□□□□□ -2.13
RAB40ALP0C0E4 AC087588.2-201ENST00000617667 426 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms