Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNU6-107P-201ENST00000516643 102 ntBASIC1.59□□□□□ -2.15
VIMP08670 AC024995.1-201ENST00000523014 93 ntBASIC1.59□□□□□ -2.15
VIMP08670 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
VIMP08670 AC110588.1-201ENST00000559699 137 ntBASIC1.59□□□□□ -2.15
VIMP08670 AC090617.3-201ENST00000573670 475 ntBASIC1.59□□□□□ -2.15
VIMP08670 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
VIMP08670 AC125232.2-201ENST00000592457 143 ntBASIC1.59□□□□□ -2.15
VIMP08670 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.59□□□□□ -2.15
VIMP08670 AC099654.5-201ENST00000636479 350 ntBASIC1.59□□□□□ -2.15
VIMP08670 Y_RNA.166-201ENST00000363730 102 ntBASIC1.58□□□□□ -2.16
VIMP08670 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
VIMP08670 FGF7P8-201ENST00000402994 292 ntBASIC1.58□□□□□ -2.16
VIMP08670 RNU4-14P-201ENST00000410858 122 ntBASIC1.58□□□□□ -2.16
VIMP08670 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.58□□□□□ -2.16
VIMP08670 RNU6-1213P-201ENST00000517075 94 ntBASIC1.58□□□□□ -2.16
VIMP08670 AP003033.1-201ENST00000527244 415 ntBASIC1.58□□□□□ -2.16
VIMP08670 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.58□□□□□ -2.16
VIMP08670 MIR4513-201ENST00000581077 86 ntBASIC1.58□□□□□ -2.16
VIMP08670 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
VIMP08670 AL359075.3-201ENST00000613288 217 ntBASIC1.58□□□□□ -2.16
VIMP08670 U6.108-201ENST00000637764 58 ntBASIC1.58□□□□□ -2.16
VIMP08670 AL161722.3-201ENST00000605789 2983 ntBASIC1.57□□□□□ -2.16
VIMP08670 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VIMP08670 RNU6-1266P-201ENST00000362794 105 ntBASIC1.57□□□□□ -2.16
VIMP08670 SNORD81.2-201ENST00000365153 76 ntBASIC1.57□□□□□ -2.16
VIMP08670 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
VIMP08670 Y_RNA.557-201ENST00000384680 107 ntBASIC1.57□□□□□ -2.16
VIMP08670 RNA5SP109-201ENST00000391010 116 ntBASIC1.57□□□□□ -2.16
VIMP08670 COX6CP10-201ENST00000416832 224 ntBASIC1.57□□□□□ -2.16
VIMP08670 SDAD1P3-201ENST00000427380 333 ntBASIC1.57□□□□□ -2.16
VIMP08670 RPL23AP50-201ENST00000434149 455 ntBASIC1.57□□□□□ -2.16
VIMP08670 AC005002.2-201ENST00000438228 269 ntBASIC1.57□□□□□ -2.16
VIMP08670 HMGN1P12-201ENST00000499125 195 ntBASIC1.57□□□□□ -2.16
VIMP08670 Y_RNA.691-201ENST00000516611 103 ntBASIC1.57□□□□□ -2.16
VIMP08670 RNU1-142P-201ENST00000516682 145 ntBASIC1.57□□□□□ -2.16
VIMP08670 AC005899.2-201ENST00000584353 90 ntBASIC1.57□□□□□ -2.16
VIMP08670 MIR7974-201ENST00000615835 79 ntBASIC1.57□□□□□ -2.16
VIMP08670 AL669831.3-213ENST00000636676 183 ntBASIC1.57□□□□□ -2.16
VIMP08670 TPTEP1-208ENST00000636884 213 ntBASIC1.57□□□□□ -2.16
VIMP08670 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
VIMP08670 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VIMP08670 RNU6-271P-201ENST00000363858 105 ntBASIC1.56□□□□□ -2.16
VIMP08670 MIR329-1-201ENST00000385028 80 ntBASIC1.56□□□□□ -2.16
VIMP08670 RNU6-1186P-201ENST00000410429 97 ntBASIC1.56□□□□□ -2.16
VIMP08670 AC092423.1-201ENST00000430165 186 ntBASIC1.56□□□□□ -2.16
VIMP08670 AL606517.2-201ENST00000442855 241 ntBASIC1.56□□□□□ -2.16
VIMP08670 U8.22-201ENST00000459141 133 ntBASIC1.56□□□□□ -2.16
VIMP08670 RPL31P58-201ENST00000469001 379 ntBASIC1.56□□□□□ -2.16
VIMP08670 AC004584.2-201ENST00000570407 410 ntBASIC1.56□□□□□ -2.16
VIMP08670 AC022432.1-201ENST00000595739 310 ntBASIC1.56□□□□□ -2.16
VIMP08670 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.56□□□□□ -2.16
VIMP08670 AC022306.2-201ENST00000617563 647 ntBASIC1.56□□□□□ -2.16
VIMP08670 AC092794.2-201ENST00000620933 563 ntBASIC1.56□□□□□ -2.16
VIMP08670 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
VIMP08670 ICE2P2-201ENST00000483823 2787 ntBASIC1.56□□□□□ -2.16
VIMP08670 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VIMP08670 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
VIMP08670 RNA5SP361-201ENST00000362686 118 ntBASIC1.55□□□□□ -2.16
VIMP08670 SNORD114-1-201ENST00000362705 72 ntBASIC1.55□□□□□ -2.16
VIMP08670 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
VIMP08670 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
VIMP08670 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
VIMP08670 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.55□□□□□ -2.16
VIMP08670 Y_RNA.635-201ENST00000459041 101 ntBASIC1.55□□□□□ -2.16
VIMP08670 SNORD65B-201ENST00000459126 73 ntBASIC1.55□□□□□ -2.16
VIMP08670 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.55□□□□□ -2.16
VIMP08670 APOOP3-201ENST00000536787 586 ntBASIC1.55□□□□□ -2.16
VIMP08670 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
VIMP08670 MIR4709-201ENST00000577272 72 ntBASIC1.55□□□□□ -2.16
VIMP08670 AC016727.1-205ENST00000605437 569 ntBASIC1.55□□□□□ -2.16
VIMP08670 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.55□□□□□ -2.16
VIMP08670 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
VIMP08670 AL359757.2-201ENST00000624309 274 ntBASIC1.55□□□□□ -2.16
VIMP08670 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.55□□□□□ -2.16
VIMP08670 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
VIMP08670 Y_RNA.67-201ENST00000362870 100 ntBASIC1.54□□□□□ -2.16
VIMP08670 RNU6-879P-201ENST00000364328 108 ntBASIC1.54□□□□□ -2.16
VIMP08670 Y_RNA.358-201ENST00000365491 99 ntBASIC1.54□□□□□ -2.16
VIMP08670 RPL21P1-201ENST00000399532 476 ntBASIC1.54□□□□□ -2.16
VIMP08670 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
VIMP08670 AL161935.2-201ENST00000414627 60 ntBASIC1.54□□□□□ -2.16
VIMP08670 TOMM22P2-201ENST00000430735 237 ntBASIC1.54□□□□□ -2.16
VIMP08670 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.54□□□□□ -2.16
VIMP08670 UQCRBP2-201ENST00000447827 297 ntBASIC1.54□□□□□ -2.16
VIMP08670 RPS27P1-201ENST00000450552 247 ntBASIC1.54□□□□□ -2.16
VIMP08670 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
VIMP08670 RPL17P19-201ENST00000489069 552 ntBASIC1.54□□□□□ -2.16
VIMP08670 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
VIMP08670 RNU6-307P-201ENST00000516743 106 ntBASIC1.54□□□□□ -2.16
VIMP08670 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
VIMP08670 AC022868.1-201ENST00000517767 391 ntBASIC1.54□□□□□ -2.16
VIMP08670 AC027419.1-201ENST00000522976 328 ntBASIC1.54□□□□□ -2.16
VIMP08670 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.54□□□□□ -2.16
VIMP08670 AC091544.4-201ENST00000555268 342 ntBASIC1.54□□□□□ -2.16
VIMP08670 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
VIMP08670 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
VIMP08670 MIR1244-1-201ENST00000612829 85 ntBASIC1.54□□□□□ -2.16
VIMP08670 AL357075.2-201ENST00000614906 189 ntBASIC1.54□□□□□ -2.16
VIMP08670 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
VIMP08670 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms