Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC024995.1-201ENST00000523014 93 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL590705.4-201ENST00000532209 134 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 DNAJC19P9-201ENST00000555084 351 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 MIR3937-201ENST00000580135 106 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL645939.4-201ENST00000604495 135 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL355802.3-201ENST00000607571 545 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL078604.3-201ENST00000615580 211 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 U4.5-201ENST00000617137 123 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL353997.5-201ENST00000618886 171 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL121890.5-201ENST00000620848 304 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 AL133216.2-202ENST00000634512 349 ntBASIC0.97□□□□□ -2.25
HLA-DQA1P01909 Y_RNA.140-201ENST00000363474 103 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU6-280P-201ENST00000364145 104 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU6-60P-201ENST00000364792 103 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU6-1013P-201ENST00000384180 107 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU6-281P-201ENST00000384212 103 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 MIR515-2-201ENST00000384883 83 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 MIR515-1-201ENST00000384884 83 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 SNORA67.5-201ENST00000391036 107 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNA5SP118-201ENST00000410385 109 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC008134.1-201ENST00000420943 193 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 MTND3P23-201ENST00000431980 347 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 NDUFB4P10-201ENST00000452541 359 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU7-34P-201ENST00000459394 64 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU1-54P-201ENST00000517181 120 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 RNU7-128P-201ENST00000517247 62 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC091144.1-201ENST00000519573 138 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC134698.4-201ENST00000523451 826 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC090821.2-201ENST00000523552 176 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 CBX3P8-201ENST00000532412 525 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC005668.1-201ENST00000571142 476 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 MIR5695-201ENST00000579717 85 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 MIR4524B-201ENST00000581569 115 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 7SK.7-201ENST00000603504 247 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AL050343.2-201ENST00000607338 280 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 ZNF299P-201ENST00000406845 1804 ntBASIC0.96□□□□□ -2.26
HLA-DQA1P01909 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HLA-DQA1P01909 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 ZNF72P-201ENST00000425869 1908 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 RNU6-222P-201ENST00000362438 107 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 RNA5SP99-201ENST00000364020 114 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 AL356776.1-201ENST00000406574 447 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 MTND4P18-201ENST00000447010 465 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 SNORD5.1-201ENST00000458800 75 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 SNORD65B-201ENST00000459126 73 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 RN7SKP210-201ENST00000459176 261 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 RNU6-329P-201ENST00000459618 107 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 RPS26P45-201ENST00000471748 340 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 AC011352.1-201ENST00000512300 793 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 AC093303.1-201ENST00000514549 295 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 SUMO2P16-201ENST00000519475 264 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 AC027419.1-201ENST00000522976 328 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 MIR4790-201ENST00000577799 79 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 MIR4303-201ENST00000581299 66 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 AC021506.2-201ENST00000612354 169 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 U6.73-201ENST00000619194 103 ntBASIC0.95□□□□□ -2.26
HLA-DQA1P01909 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HLA-DQA1P01909 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.86-201ENST00000363020 111 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.106-201ENST00000363189 100 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 RNU6-457P-201ENST00000363999 107 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 MIR513A1-201ENST00000385138 129 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 RNA5SP213-201ENST00000391031 106 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 RPS29P28-201ENST00000446439 141 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DQA1P01909 MTND5P5-201ENST00000503764 376 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 AL161670.1-201ENST00000554348 137 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 CYP3A52P-201ENST00000563326 91 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 AC010999.1-201ENST00000611856 324 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 AC093913.1-201ENST00000614178 329 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 MIR8054-201ENST00000620877 86 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DQA1P01909 ZNF209P-201ENST00000593450 2304 ntBASIC0.94□□□□□ -2.26
HLA-DQA1P01909 MTND5P16-201ENST00000460269 1703 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 SNORD33-201ENST00000362761 85 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 RNA5SP259-201ENST00000365541 109 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 RNU6-1031P-201ENST00000384773 107 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 SNORA12.1-201ENST00000390873 148 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 RNU6-440P-201ENST00000390882 105 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 EIF1P1-201ENST00000421436 341 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC069439.1-201ENST00000494739 167 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 AC026782.1-201ENST00000512952 449 ntBASIC0.93□□□□□ -2.26
HLA-DQA1P01909 Y_RNA.655-201ENST00000515919 96 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms