Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNU4-9P-201ENST00000364951 139 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
TNFP01375 SNORD100-201ENST00000408573 76 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNU6-293P-201ENST00000411259 106 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC004866.1-201ENST00000411748 78 ntBASIC-0.54□□□□□ -2.5
TNFP01375 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.54□□□□□ -2.5
TNFP01375 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.54□□□□□ -2.5
TNFP01375 USP9YP11-201ENST00000427537 717 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.54□□□□□ -2.5
TNFP01375 USP9YP25-201ENST00000457708 443 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNU7-56P-201ENST00000458744 62 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC112206.4-201ENST00000515142 405 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNA5SP268-201ENST00000516828 124 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNU2-46P-201ENST00000517038 113 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.54□□□□□ -2.5
TNFP01375 LRRC34P1-201ENST00000542742 915 ntBASIC-0.54□□□□□ -2.5
TNFP01375 MIR5708-201ENST00000579723 85 ntBASIC-0.54□□□□□ -2.5
TNFP01375 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC020891.4-201ENST00000605745 93 ntBASIC-0.54□□□□□ -2.5
TNFP01375 MIR6507-201ENST00000613630 70 ntBASIC-0.54□□□□□ -2.5
TNFP01375 FRG1KP-201ENST00000623592 341 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC106754.1-201ENST00000562632 1513 ntBASIC-0.54□□□□□ -2.5
TNFP01375 AC005592.1-201ENST00000566527 1640 ntBASIC-0.55□□□□□ -2.5
TNFP01375 RNU6-960P-201ENST00000364056 120 ntBASIC-0.55□□□□□ -2.5
TNFP01375 RNU6-30P-201ENST00000384561 107 ntBASIC-0.55□□□□□ -2.5
TNFP01375 MIR938-201ENST00000401216 83 ntBASIC-0.55□□□□□ -2.5
TNFP01375 MIR1265-201ENST00000408444 86 ntBASIC-0.55□□□□□ -2.5
TNFP01375 MIR1298-201ENST00000408783 112 ntBASIC-0.55□□□□□ -2.5
TNFP01375 RNU2-3P-201ENST00000410144 191 ntBASIC-0.55□□□□□ -2.5
TNFP01375 RNU6-613P-201ENST00000410412 108 ntBASIC-0.55□□□□□ -2.5
TNFP01375 MTND4P19-201ENST00000446659 478 ntBASIC-0.55□□□□□ -2.5
TNFP01375 AC109327.2-201ENST00000448339 378 ntBASIC-0.55□□□□□ -2.5
TNFP01375 AL500527.2-201ENST00000454105 95 ntBASIC-0.55□□□□□ -2.5
TNFP01375 AC074198.2-201ENST00000508153 258 ntBASIC-0.55□□□□□ -2.5
TNFP01375 RNU6-138P-201ENST00000515952 107 ntBASIC-0.55□□□□□ -2.5
TNFP01375 AC133485.4-201ENST00000561835 220 ntBASIC-0.55□□□□□ -2.5
TNFP01375 MIR3152-201ENST00000579801 74 ntBASIC-0.55□□□□□ -2.5
TNFP01375 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.55□□□□□ -2.5
TNFP01375 AC246785.4-201ENST00000605374 287 ntBASIC-0.55□□□□□ -2.5
TNFP01375 AL355073.2-201ENST00000612106 557 ntBASIC-0.55□□□□□ -2.5
TNFP01375 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.55□□□□□ -2.5
TNFP01375 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.56□□□□□ -2.5
TNFP01375 RNU6-336P-201ENST00000364891 107 ntBASIC-0.56□□□□□ -2.5
TNFP01375 SNORD49B-201ENST00000365172 72 ntBASIC-0.56□□□□□ -2.5
TNFP01375 RNU6-650P-201ENST00000365658 111 ntBASIC-0.56□□□□□ -2.5
TNFP01375 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.56□□□□□ -2.5
TNFP01375 MIR208B-201ENST00000401172 77 ntBASIC-0.56□□□□□ -2.5
TNFP01375 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.56□□□□□ -2.5
TNFP01375 TIMM9P2-201ENST00000419324 266 ntBASIC-0.56□□□□□ -2.5
TNFP01375 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.56□□□□□ -2.5
TNFP01375 MTND1P14-201ENST00000427400 950 ntBASIC-0.56□□□□□ -2.5
TNFP01375 HSFY5P-201ENST00000453726 309 ntBASIC-0.56□□□□□ -2.5
TNFP01375 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.56□□□□□ -2.5
TNFP01375 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
TNFP01375 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.56□□□□□ -2.5
TNFP01375 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.56□□□□□ -2.5
TNFP01375 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.56□□□□□ -2.5
TNFP01375 AC138869.1-201ENST00000568623 124 ntBASIC-0.56□□□□□ -2.5
TNFP01375 AC100830.2-201ENST00000581636 240 ntBASIC-0.56□□□□□ -2.5
TNFP01375 MIR4804-201ENST00000581683 73 ntBASIC-0.56□□□□□ -2.5
TNFP01375 VN1R87P-201ENST00000596706 487 ntBASIC-0.56□□□□□ -2.5
TNFP01375 AL356596.1-201ENST00000624230 379 ntBASIC-0.56□□□□□ -2.5
TNFP01375 SNORA43.4-201ENST00000629559 138 ntBASIC-0.56□□□□□ -2.5
TNFP01375 SNORA25.7-201ENST00000364375 127 ntBASIC-0.57□□□□□ -2.5
TNFP01375 MIR196A1-201ENST00000388006 70 ntBASIC-0.57□□□□□ -2.5
TNFP01375 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.57□□□□□ -2.5
TNFP01375 SUMO1P2-201ENST00000452524 304 ntBASIC-0.57□□□□□ -2.5
TNFP01375 RNU7-73P-201ENST00000458743 63 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.57□□□□□ -2.5
TNFP01375 AC010486.2-201ENST00000505572 483 ntBASIC-0.57□□□□□ -2.5
TNFP01375 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.57□□□□□ -2.5
TNFP01375 RNU7-99P-201ENST00000516271 62 ntBASIC-0.57□□□□□ -2.5
TNFP01375 RNU6-977P-201ENST00000516411 103 ntBASIC-0.57□□□□□ -2.5
TNFP01375 RNU6-504P-201ENST00000516568 104 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AC109479.2-201ENST00000517842 174 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AP001372.4-201ENST00000524889 472 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AL512347.1-201ENST00000566420 503 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AC096720.1-201ENST00000604441 183 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AC072039.2-201ENST00000608883 439 ntBASIC-0.57□□□□□ -2.5
TNFP01375 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.57□□□□□ -2.5
TNFP01375 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.57□□□□□ -2.5
TNFP01375 U6.73-201ENST00000619194 103 ntBASIC-0.57□□□□□ -2.5
TNFP01375 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.57□□□□□ -2.5
TNFP01375 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.57□□□□□ -2.5
TNFP01375 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.58□□□□□ -2.5
TNFP01375 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.58□□□□□ -2.5
TNFP01375 SNORD45.3-201ENST00000363836 72 ntBASIC-0.58□□□□□ -2.5
TNFP01375 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.58□□□□□ -2.5
TNFP01375 MLLT10P1-201ENST00000418346 262 ntBASIC-0.58□□□□□ -2.5
TNFP01375 AC090960.1-201ENST00000421072 306 ntBASIC-0.58□□□□□ -2.5
TNFP01375 BTF3P11-201ENST00000426582 477 ntBASIC-0.58□□□□□ -2.5
TNFP01375 SNAP23P1-201ENST00000433229 246 ntBASIC-0.58□□□□□ -2.5
TNFP01375 MTCO1P5-201ENST00000433573 344 ntBASIC-0.58□□□□□ -2.5
TNFP01375 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.58□□□□□ -2.5
TNFP01375 AC079354.2-201ENST00000453523 154 ntBASIC-0.58□□□□□ -2.5
TNFP01375 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.58□□□□□ -2.5
TNFP01375 MTCO3P27-201ENST00000514397 196 ntBASIC-0.58□□□□□ -2.5
TNFP01375 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.58□□□□□ -2.5
TNFP01375 OR8K2P-201ENST00000524645 927 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms