Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-875P-201ENST00000516488 106 ntBASIC2.06□□□□□ -2.08
DDX58O95786 Y_RNA.702-201ENST00000516843 96 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-856P-201ENST00000516959 98 ntBASIC2.06□□□□□ -2.08
DDX58O95786 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
DDX58O95786 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX58O95786 AC004584.2-201ENST00000570407 410 ntBASIC2.06□□□□□ -2.08
DDX58O95786 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX58O95786 AC010999.1-201ENST00000611856 324 ntBASIC2.06□□□□□ -2.08
DDX58O95786 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
DDX58O95786 MIR1244-1-201ENST00000612829 85 ntBASIC2.06□□□□□ -2.08
DDX58O95786 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
DDX58O95786 MIR1244-3-201ENST00000635744 85 ntBASIC2.06□□□□□ -2.08
DDX58O95786 MTND4LP32-201ENST00000636111 270 ntBASIC2.06□□□□□ -2.08
DDX58O95786 AC068205.3-201ENST00000636385 468 ntBASIC2.06□□□□□ -2.08
DDX58O95786 MIR1244-2-201ENST00000636449 85 ntBASIC2.06□□□□□ -2.08
DDX58O95786 MIR1244-4-202ENST00000636813 85 ntBASIC2.06□□□□□ -2.08
DDX58O95786 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
DDX58O95786 RNU1-96P-201ENST00000364163 162 ntBASIC2.05□□□□□ -2.08
DDX58O95786 Y_RNA.259-201ENST00000364619 101 ntBASIC2.05□□□□□ -2.08
DDX58O95786 Y_RNA.358-201ENST00000365491 99 ntBASIC2.05□□□□□ -2.08
DDX58O95786 Y_RNA.364-201ENST00000365532 101 ntBASIC2.05□□□□□ -2.08
DDX58O95786 Y_RNA.415-201ENST00000384012 112 ntBASIC2.05□□□□□ -2.08
DDX58O95786 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.05□□□□□ -2.08
DDX58O95786 AC091179.3-201ENST00000474761 144 ntBASIC2.05□□□□□ -2.08
DDX58O95786 HMGN1P13-201ENST00000505795 138 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC011406.1-201ENST00000512440 370 ntBASIC2.05□□□□□ -2.08
DDX58O95786 RNU6-1146P-201ENST00000516282 102 ntBASIC2.05□□□□□ -2.08
DDX58O95786 RNU6-107P-201ENST00000516643 102 ntBASIC2.05□□□□□ -2.08
DDX58O95786 SNORA44.1-201ENST00000517031 108 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC093023.1-201ENST00000547375 507 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC090617.3-201ENST00000573670 475 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC025253.1-201ENST00000613623 543 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC133104.2-201ENST00000615272 193 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC104260.1-201ENST00000616660 539 ntBASIC2.05□□□□□ -2.08
DDX58O95786 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.05□□□□□ -2.08
DDX58O95786 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
DDX58O95786 AC006001.4-201ENST00000622243 395 ntBASIC2.05□□□□□ -2.08
DDX58O95786 RNY3P14-201ENST00000384309 102 ntBASIC2.04□□□□□ -2.08
DDX58O95786 MTCYBP4-201ENST00000401524 249 ntBASIC2.04□□□□□ -2.08
DDX58O95786 RN7SKP101-201ENST00000411376 320 ntBASIC2.04□□□□□ -2.08
DDX58O95786 MIR2053-201ENST00000459295 91 ntBASIC2.04□□□□□ -2.08
DDX58O95786 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX58O95786 AC022493.2-201ENST00000506122 481 ntBASIC2.04□□□□□ -2.08
DDX58O95786 RNU6-120P-201ENST00000516077 103 ntBASIC2.04□□□□□ -2.08
DDX58O95786 AC022868.1-201ENST00000517767 391 ntBASIC2.04□□□□□ -2.08
DDX58O95786 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX58O95786 SUB1P4-201ENST00000566062 339 ntBASIC2.04□□□□□ -2.08
DDX58O95786 SNORD53B-201ENST00000577887 78 ntBASIC2.04□□□□□ -2.08
DDX58O95786 MZT1P2-201ENST00000604387 248 ntBASIC2.04□□□□□ -2.08
DDX58O95786 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.04□□□□□ -2.08
DDX58O95786 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
DDX58O95786 RNU6-661P-201ENST00000362409 107 ntBASIC2.03□□□□□ -2.08
DDX58O95786 RNU6-879P-201ENST00000364328 108 ntBASIC2.03□□□□□ -2.08
DDX58O95786 SNORA67.2-201ENST00000384300 149 ntBASIC2.03□□□□□ -2.08
DDX58O95786 Y_RNA.557-201ENST00000384680 107 ntBASIC2.03□□□□□ -2.08
DDX58O95786 Y_RNA.595-201ENST00000410403 105 ntBASIC2.03□□□□□ -2.08
DDX58O95786 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
DDX58O95786 UBE2V1P7-201ENST00000446395 340 ntBASIC2.03□□□□□ -2.08
DDX58O95786 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.03□□□□□ -2.08
DDX58O95786 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.03□□□□□ -2.08
DDX58O95786 AL132765.2-201ENST00000610812 351 ntBASIC2.03□□□□□ -2.08
DDX58O95786 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.03□□□□□ -2.08
DDX58O95786 MTND5P35-201ENST00000557537 1720 ntBASIC2.03□□□□□ -2.09
DDX58O95786 RNU6-890P-201ENST00000384121 107 ntBASIC2.02□□□□□ -2.09
DDX58O95786 RNU6-281P-201ENST00000384212 103 ntBASIC2.02□□□□□ -2.09
DDX58O95786 RNU1-139P-201ENST00000391307 165 ntBASIC2.02□□□□□ -2.09
DDX58O95786 SNORA75.6-201ENST00000391318 127 ntBASIC2.02□□□□□ -2.09
DDX58O95786 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
DDX58O95786 MTCO3P10-201ENST00000455912 772 ntBASIC2.02□□□□□ -2.09
DDX58O95786 AC112492.4-201ENST00000456549 352 ntBASIC2.02□□□□□ -2.09
DDX58O95786 AC010409.1-201ENST00000487382 476 ntBASIC2.02□□□□□ -2.09
DDX58O95786 RPL36AP21-201ENST00000490372 323 ntBASIC2.02□□□□□ -2.09
DDX58O95786 RNU6-277P-201ENST00000516272 106 ntBASIC2.02□□□□□ -2.09
DDX58O95786 Y_RNA.683-201ENST00000516508 93 ntBASIC2.02□□□□□ -2.09
DDX58O95786 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
DDX58O95786 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX58O95786 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
DDX58O95786 AL355375.2-201ENST00000574825 175 ntBASIC2.02□□□□□ -2.09
DDX58O95786 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
DDX58O95786 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
DDX58O95786 AC010900.2-201ENST00000604508 210 ntBASIC2.02□□□□□ -2.09
DDX58O95786 AC084781.2-201ENST00000615568 161 ntBASIC2.02□□□□□ -2.09
DDX58O95786 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.02□□□□□ -2.09
DDX58O95786 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.02□□□□□ -2.09
DDX58O95786 AC022513.1-201ENST00000624512 117 ntBASIC2.02□□□□□ -2.09
DDX58O95786 AC008873.1-201ENST00000625051 138 ntBASIC2.02□□□□□ -2.09
DDX58O95786 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
DDX58O95786 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
DDX58O95786 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
DDX58O95786 RNU6-874P-201ENST00000362390 105 ntBASIC2.01□□□□□ -2.09
DDX58O95786 Y_RNA.529-201ENST00000384586 119 ntBASIC2.01□□□□□ -2.09
DDX58O95786 MIR520A-201ENST00000384862 85 ntBASIC2.01□□□□□ -2.09
DDX58O95786 MIR548B-201ENST00000385247 97 ntBASIC2.01□□□□□ -2.09
DDX58O95786 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.01□□□□□ -2.09
DDX58O95786 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
DDX58O95786 RNA5SP504-201ENST00000410676 117 ntBASIC2.01□□□□□ -2.09
DDX58O95786 AC114482.1-201ENST00000418010 247 ntBASIC2.01□□□□□ -2.09
DDX58O95786 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX58O95786 HMGN2P34-201ENST00000437647 269 ntBASIC2.01□□□□□ -2.09
DDX58O95786 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms