Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-929P-201ENST00000384429 107 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 MIR610-201ENST00000385139 96 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AC004866.1-201ENST00000411748 78 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AL355994.1-201ENST00000424379 260 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.17□□□□□ -2.44
ABCA1O95477 ELOCP24-201ENST00000456370 334 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 SNORD126-201ENST00000459475 77 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 MTND3P25-201ENST00000509243 135 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 RNA5SP227-201ENST00000516184 113 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 RNU6-977P-201ENST00000516411 103 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 MIR3118-1-201ENST00000581787 76 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 MIR520C-201ENST00000385005 87 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 MIR208B-201ENST00000401172 77 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.17□□□□□ -2.44
ABCA1O95477 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 snoU13.21-201ENST00000459368 105 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 HMGN2P26-201ENST00000463169 339 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AC091021.1-201ENST00000468051 388 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AC116353.3-201ENST00000511215 249 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.17□□□□□ -2.44
ABCA1O95477 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 MIR4804-201ENST00000581683 73 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 AP001836.1-201ENST00000604675 523 ntBASIC-0.17□□□□□ -2.44
ABCA1O95477 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
ABCA1O95477 SNORD56.2-201ENST00000363242 71 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 SNORD115-24-201ENST00000363528 82 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 RNA5SP482-201ENST00000391269 118 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 RNU6-613P-201ENST00000410412 108 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.18□□□□□ -2.44
ABCA1O95477 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AC079140.5-201ENST00000507882 310 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 MTND1P22-201ENST00000510572 951 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 RNU7-99P-201ENST00000516271 62 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
ABCA1O95477 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.18□□□□□ -2.44
ABCA1O95477 AC112693.2-201ENST00000556538 232 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.18□□□□□ -2.44
ABCA1O95477 MIR4307-201ENST00000582802 84 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AC112187.2-201ENST00000604345 283 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.18□□□□□ -2.44
ABCA1O95477 AL589826.1-201ENST00000340697 249 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.18□□□□□ -2.44
ABCA1O95477 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 RNU6-925P-201ENST00000384629 104 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.18□□□□□ -2.44
ABCA1O95477 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AC091874.1-201ENST00000511402 339 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 RNU6-201P-201ENST00000517100 61 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.18□□□□□ -2.44
ABCA1O95477 MRPS36P4-201ENST00000534436 298 ntBASIC-0.18□□□□□ -2.44
ABCA1O95477 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.18□□□□□ -2.44
ABCA1O95477 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 SNORA67.2-201ENST00000384300 149 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 MIR526A1-201ENST00000384897 85 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 RNU6-994P-201ENST00000410507 111 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.19□□□□□ -2.44
ABCA1O95477 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.19□□□□□ -2.44
ABCA1O95477 AC106883.1-201ENST00000418805 562 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 MTND1P12-201ENST00000455231 147 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 RNU7-182P-201ENST00000459009 62 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 RNU6-221P-201ENST00000459541 99 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.19□□□□□ -2.44
ABCA1O95477 RBBP4P6-201ENST00000508098 202 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 RNU6-94P-201ENST00000607728 107 ntBASIC-0.19□□□□□ -2.44
ABCA1O95477 MTND5P32-201ENST00000560711 1802 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 RNU6-769P-201ENST00000384407 104 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 RNA5SP451-201ENST00000410588 110 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 MTND1P4-201ENST00000435196 415 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.2□□□□□ -2.44
ABCA1O95477 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 SNORA25.17-201ENST00000517184 124 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AC008521.1-201ENST00000587471 187 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AL355297.3-201ENST00000604082 446 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AC006435.5-201ENST00000624486 112 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 RNU6-336P-201ENST00000364891 107 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 MIR452-201ENST00000385020 85 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 MIR586-201ENST00000385035 97 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AC012306.1-201ENST00000423267 114 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 MTND1P20-201ENST00000430341 950 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.2□□□□□ -2.44
ABCA1O95477 AC097462.1-201ENST00000514125 324 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 RNU6-344P-201ENST00000516635 111 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 RNA5SP454-201ENST00000517231 127 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.2□□□□□ -2.44
ABCA1O95477 AP002004.2-201ENST00000531656 154 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.2□□□□□ -2.44
ABCA1O95477 AL596327.1-201ENST00000603629 213 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 BCRP9-201ENST00000605312 388 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
ABCA1O95477 SNORA33-201ENST00000363664 130 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 RNU6-116P-201ENST00000384042 109 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms