Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC103996.1-201ENST00000555468 102 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 MIR4804-201ENST00000581683 73 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 AC008521.1-201ENST00000587471 187 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 AL592221.1-201ENST00000605266 382 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 RNU6-88P-201ENST00000606801 100 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 AC008873.1-201ENST00000625051 138 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.61□□□□□ -2.51
SIX6O95475 MTND4P4-201ENST00000439033 1366 ntBASIC-0.61□□□□□ -2.51
SIX6O95475 SNORD14.1-201ENST00000365609 90 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 SNORA24.1-201ENST00000384401 135 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 RNU6-925P-201ENST00000384629 104 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 MIR489-201ENST00000384923 84 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 RNU6-269P-201ENST00000391077 97 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 RNU2-8P-201ENST00000410727 190 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 AL117339.3-201ENST00000418733 162 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.62□□□□□ -2.51
SIX6O95475 AC114811.1-201ENST00000507207 168 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 RNU6-334P-201ENST00000517072 102 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 MRPS36P4-201ENST00000534436 298 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 MTND4LP25-201ENST00000570218 163 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 AP000907.4-201ENST00000604143 237 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.62□□□□□ -2.51
SIX6O95475 SNORD56.2-201ENST00000363242 71 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 RNA5SP457-201ENST00000363657 124 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 RNU6-224P-201ENST00000384055 107 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 SNORA67.2-201ENST00000384300 149 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 MIR452-201ENST00000385020 85 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 ZNF885P-201ENST00000420174 1098 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 HMGN2P22-201ENST00000427588 175 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 PCNPP5-201ENST00000452246 481 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 MTND1P12-201ENST00000455231 147 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.63□□□□□ -2.51
SIX6O95475 RNU4-49P-201ENST00000516080 140 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 AC023442.1-201ENST00000531247 422 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 AC009712.1-201ENST00000564938 316 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 AC012433.1-201ENST00000588916 398 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.63□□□□□ -2.51
SIX6O95475 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.63□□□□□ -2.51
SIX6O95475 AC099786.3-201ENST00000565735 1410 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 RNY4P24-201ENST00000362735 96 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 RNU6-560P-201ENST00000364007 108 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 RNU6-934P-201ENST00000365154 107 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MIR196A2-201ENST00000385189 110 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MIR760-201ENST00000390220 80 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MTND4P3-201ENST00000417829 541 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.64□□□□□ -2.51
SIX6O95475 MTND1P4-201ENST00000435196 415 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 AC069271.1-201ENST00000445577 156 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 AC005042.3-201ENST00000453230 174 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 RPS29P27-201ENST00000463711 170 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 RPL17P19-201ENST00000489069 552 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MIR2115-201ENST00000516657 100 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MIR4771-2-201ENST00000577758 74 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MIR4771-1-201ENST00000582617 74 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 MIR4438-201ENST00000585271 93 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 AL670379.3-201ENST00000605040 251 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 AC011921.3-201ENST00000605540 361 ntBASIC-0.64□□□□□ -2.51
SIX6O95475 SNORA1B-201ENST00000362535 133 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 SNORA36.1-201ENST00000363424 132 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 RNU6-723P-201ENST00000383973 107 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 MIR562-201ENST00000384894 95 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 RNA5SP300-201ENST00000391197 107 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 AC098592.1-201ENST00000419352 333 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 MTND4LP11-201ENST00000422184 280 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 AC015818.7-201ENST00000428754 109 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.65□□□□□ -2.51
SIX6O95475 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.65□□□□□ -2.51
SIX6O95475 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.65□□□□□ -2.51
SIX6O95475 AC087499.7-201ENST00000441958 109 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 RNU7-43P-201ENST00000516554 64 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.65□□□□□ -2.51
SIX6O95475 AC025449.1-201ENST00000603896 529 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 AC121334.2-201ENST00000605387 271 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
SIX6O95475 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 RNU6-161P-201ENST00000363051 106 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 RNU6-137P-201ENST00000363680 108 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 AL031274.1-201ENST00000450334 232 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 RNU6-782P-201ENST00000516852 104 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.66□□□□□ -2.52
SIX6O95475 AP002004.2-201ENST00000531656 154 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 FRG2DP-202ENST00000566967 323 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.52
SIX6O95475 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.66□□□□□ -2.52
SIX6O95475 AL355143.1-201ENST00000407101 841 ntBASIC-0.67□□□□□ -2.52
SIX6O95475 USP9YP21-201ENST00000420603 432 ntBASIC-0.67□□□□□ -2.52
SIX6O95475 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.67□□□□□ -2.52
SIX6O95475 AC079354.2-201ENST00000453523 154 ntBASIC-0.67□□□□□ -2.52
SIX6O95475 RNA5SP285-201ENST00000516619 119 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms