Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TPT1P7-201ENST00000458300 517 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AL049830.1-201ENST00000468034 425 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.51□□□□□ -2.33
VAPBO95292 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.51□□□□□ -2.33
VAPBO95292 RNA5SP220-201ENST00000516298 104 ntBASIC0.51□□□□□ -2.33
VAPBO95292 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
VAPBO95292 RNU2-56P-201ENST00000516826 190 ntBASIC0.51□□□□□ -2.33
VAPBO95292 RNU6-1198P-201ENST00000516904 67 ntBASIC0.51□□□□□ -2.33
VAPBO95292 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.51□□□□□ -2.33
VAPBO95292 MIR3915-201ENST00000578518 97 ntBASIC0.51□□□□□ -2.33
VAPBO95292 MIR151B-201ENST00000584249 96 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AL078603.1-201ENST00000603824 313 ntBASIC0.51□□□□□ -2.33
VAPBO95292 AC027449.1-201ENST00000608890 407 ntBASIC0.51□□□□□ -2.33
VAPBO95292 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.5□□□□□ -2.33
VAPBO95292 RNU6-784P-201ENST00000384330 106 ntBASIC0.5□□□□□ -2.33
VAPBO95292 RNU6-424P-201ENST00000384367 105 ntBASIC0.5□□□□□ -2.33
VAPBO95292 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
VAPBO95292 SNORD37.1-201ENST00000390968 65 ntBASIC0.5□□□□□ -2.33
VAPBO95292 RNU6-325P-201ENST00000411132 105 ntBASIC0.5□□□□□ -2.33
VAPBO95292 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.5□□□□□ -2.33
VAPBO95292 MTCO2P18-201ENST00000457151 658 ntBASIC0.5□□□□□ -2.33
VAPBO95292 TPTE2P5-203ENST00000458118 728 ntBASIC0.5□□□□□ -2.33
VAPBO95292 RPL23AP75-201ENST00000491601 451 ntBASIC0.5□□□□□ -2.33
VAPBO95292 MTCO1P29-201ENST00000496868 288 ntBASIC0.5□□□□□ -2.33
VAPBO95292 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.5□□□□□ -2.33
VAPBO95292 RNU7-12P-201ENST00000516030 62 ntBASIC0.5□□□□□ -2.33
VAPBO95292 AK6P2-201ENST00000549020 471 ntBASIC0.5□□□□□ -2.33
VAPBO95292 MTND1P15-201ENST00000579262 949 ntBASIC0.5□□□□□ -2.33
VAPBO95292 MIR4424-201ENST00000585257 86 ntBASIC0.5□□□□□ -2.33
VAPBO95292 AC092747.3-201ENST00000603769 301 ntBASIC0.5□□□□□ -2.33
VAPBO95292 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
VAPBO95292 AL354950.2-201ENST00000617939 290 ntBASIC0.5□□□□□ -2.33
VAPBO95292 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
VAPBO95292 Y_RNA.116-201ENST00000363292 103 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6-1335P-201ENST00000365426 107 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6-214P-201ENST00000384130 107 ntBASIC0.49□□□□□ -2.33
VAPBO95292 MIR562-201ENST00000384894 95 ntBASIC0.49□□□□□ -2.33
VAPBO95292 MIR518E-201ENST00000385252 88 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.49□□□□□ -2.33
VAPBO95292 MTND2P18-201ENST00000419962 1030 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AL031667.1-201ENST00000440222 725 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AC104332.1-201ENST00000440471 797 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AL359672.1-201ENST00000442302 409 ntBASIC0.49□□□□□ -2.33
VAPBO95292 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.49□□□□□ -2.33
VAPBO95292 snoU13.25-201ENST00000458945 104 ntBASIC0.49□□□□□ -2.33
VAPBO95292 MTCO3P38-201ENST00000468910 766 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.49□□□□□ -2.33
VAPBO95292 AC091133.4-201ENST00000511142 308 ntBASIC0.49□□□□□ -2.33
VAPBO95292 SNORD111.1-201ENST00000516421 86 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU7-28P-201ENST00000516759 62 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6-430P-201ENST00000517078 107 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6-58P-201ENST00000517143 103 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AL157687.1-201ENST00000554853 619 ntBASIC0.49□□□□□ -2.33
VAPBO95292 Z83818.1-201ENST00000603584 150 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AC109347.2-201ENST00000610220 349 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AL360219.1-201ENST00000610230 366 ntBASIC0.49□□□□□ -2.33
VAPBO95292 AC103705.1-201ENST00000619013 241 ntBASIC0.49□□□□□ -2.33
VAPBO95292 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
VAPBO95292 ELL2P3-201ENST00000457883 1602 ntBASIC0.49□□□□□ -2.33
VAPBO95292 RNU6-82P-201ENST00000363970 107 ntBASIC0.48□□□□□ -2.33
VAPBO95292 SNORD87-201ENST00000364849 89 ntBASIC0.48□□□□□ -2.33
VAPBO95292 U8.16-201ENST00000391279 133 ntBASIC0.48□□□□□ -2.33
VAPBO95292 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.48□□□□□ -2.33
VAPBO95292 AL365203.2-201ENST00000423444 196 ntBASIC0.48□□□□□ -2.33
VAPBO95292 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.48□□□□□ -2.33
VAPBO95292 MRPS10P2-201ENST00000431226 381 ntBASIC0.48□□□□□ -2.33
VAPBO95292 USP9YP29-201ENST00000445112 563 ntBASIC0.48□□□□□ -2.33
VAPBO95292 MRPS10P1-201ENST00000448483 130 ntBASIC0.48□□□□□ -2.33
VAPBO95292 AC093850.1-201ENST00000454121 251 ntBASIC0.48□□□□□ -2.33
VAPBO95292 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.48□□□□□ -2.33
VAPBO95292 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.48□□□□□ -2.33
VAPBO95292 SNORA25.14-201ENST00000516481 132 ntBASIC0.48□□□□□ -2.33
VAPBO95292 RPL21P9-201ENST00000556149 474 ntBASIC0.48□□□□□ -2.33
VAPBO95292 AC025627.3-201ENST00000582078 182 ntBASIC0.48□□□□□ -2.33
VAPBO95292 AC087683.1-201ENST00000591187 441 ntBASIC0.48□□□□□ -2.33
VAPBO95292 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
VAPBO95292 SNORD115-8-201ENST00000363856 82 ntBASIC0.47□□□□□ -2.33
VAPBO95292 SNORD115-38-201ENST00000365037 82 ntBASIC0.47□□□□□ -2.33
VAPBO95292 RNU5A-6P-201ENST00000384136 116 ntBASIC0.47□□□□□ -2.33
VAPBO95292 RNU6-42P-201ENST00000384165 107 ntBASIC0.47□□□□□ -2.33
VAPBO95292 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.47□□□□□ -2.33
VAPBO95292 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.47□□□□□ -2.33
VAPBO95292 AC113410.1-201ENST00000505029 247 ntBASIC0.47□□□□□ -2.33
VAPBO95292 SNORA19.2-201ENST00000516013 114 ntBASIC0.47□□□□□ -2.33
VAPBO95292 AC027419.1-201ENST00000522976 328 ntBASIC0.47□□□□□ -2.33
VAPBO95292 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
VAPBO95292 AL096861.1-201ENST00000610899 123 ntBASIC0.47□□□□□ -2.33
VAPBO95292 MIR6079-201ENST00000635807 62 ntBASIC0.47□□□□□ -2.33
VAPBO95292 Y_RNA.100-201ENST00000363141 102 ntBASIC0.46□□□□□ -2.34
VAPBO95292 Y_RNA.330-201ENST00000365230 109 ntBASIC0.46□□□□□ -2.34
VAPBO95292 SNORA26.8-201ENST00000391306 124 ntBASIC0.46□□□□□ -2.34
VAPBO95292 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
VAPBO95292 NDUFA5P4-201ENST00000436704 385 ntBASIC0.46□□□□□ -2.34
VAPBO95292 AC098869.1-201ENST00000481627 292 ntBASIC0.46□□□□□ -2.34
VAPBO95292 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.46□□□□□ -2.34
VAPBO95292 AC023157.2-201ENST00000540596 141 ntBASIC0.46□□□□□ -2.34
VAPBO95292 CPDP1-201ENST00000579660 283 ntBASIC0.46□□□□□ -2.34
VAPBO95292 AC004832.4-201ENST00000608952 331 ntBASIC0.46□□□□□ -2.34
VAPBO95292 AC006435.5-201ENST00000624486 112 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms