Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC008134.1-201ENST00000420943 193 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 MTCO3P18-201ENST00000440206 761 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.95□□□□□ -2.26
SEMA3DO95025 HMGN2P26-201ENST00000463169 339 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 RNU1-142P-201ENST00000516682 145 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 RNA5SP54-201ENST00000516951 92 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 RNA5SP404-201ENST00000517118 132 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 AC136932.1-201ENST00000574771 208 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 POLR3GP2-201ENST00000588366 668 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 AL138726.1-201ENST00000614873 333 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
SEMA3DO95025 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU1-22P-201ENST00000363334 158 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU6-873P-201ENST00000363833 107 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 SNORD115-8-201ENST00000363856 82 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 Y_RNA.256-201ENST00000364594 104 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 SNORD115-38-201ENST00000365037 82 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 Y_RNA.319-201ENST00000365138 92 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 Y_RNA.415-201ENST00000384012 112 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 MIR517A-201ENST00000385001 87 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU6-332P-201ENST00000391193 108 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU6-1186P-201ENST00000410429 97 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU2-16P-201ENST00000410712 136 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNA5SP247-201ENST00000411181 105 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.94□□□□□ -2.26
SEMA3DO95025 RPL30P16-201ENST00000419341 429 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU7-66P-201ENST00000459469 62 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.94□□□□□ -2.26
SEMA3DO95025 AC027288.2-201ENST00000553028 243 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 UBL5P4-201ENST00000562584 236 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.94□□□□□ -2.26
SEMA3DO95025 FRG2DP-202ENST00000566967 323 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 MIR3664-201ENST00000579074 99 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 MIR3672-201ENST00000584290 82 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 AC103591.3-201ENST00000608684 209 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 AL359075.3-201ENST00000613288 217 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 MTND4P12-201ENST00000498999 1377 ntBASIC0.94□□□□□ -2.26
SEMA3DO95025 RNU6-451P-201ENST00000362921 107 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 RNU6-245P-201ENST00000384020 107 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 RNU6-1031P-201ENST00000384773 107 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SEMA3DO95025 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.93□□□□□ -2.26
SEMA3DO95025 RPL30P10-201ENST00000488148 337 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
SEMA3DO95025 RNU6-256P-201ENST00000516747 97 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 RN7SKP88-201ENST00000516847 250 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 RNU7-128P-201ENST00000517247 62 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 MTND2P38-201ENST00000522536 667 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.93□□□□□ -2.26
SEMA3DO95025 PIGPP4-201ENST00000584447 307 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 7SK.8-201ENST00000612110 250 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.93□□□□□ -2.26
SEMA3DO95025 7SK.11-201ENST00000615477 250 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 7SK.13-201ENST00000622040 250 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.93□□□□□ -2.26
SEMA3DO95025 AC099654.5-201ENST00000636479 350 ntBASIC0.93□□□□□ -2.26
SEMA3DO95025 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
SEMA3DO95025 RNU6-1123P-201ENST00000362347 106 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 Y_RNA.41-201ENST00000362646 102 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 RNU6-1090P-201ENST00000364065 94 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 SNORD115-32-201ENST00000364079 82 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.92□□□□□ -2.26
SEMA3DO95025 Y_RNA.559-201ENST00000384686 107 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 MIR153-2-201ENST00000385225 87 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SEMA3DO95025 MIR1185-2-201ENST00000408687 86 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AC091179.3-201ENST00000474761 144 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 RPS23P4-201ENST00000487908 423 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
SEMA3DO95025 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.92□□□□□ -2.26
SEMA3DO95025 NBR2-204ENST00000587322 63 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AC080078.3-201ENST00000605407 463 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AF250324.2-201ENST00000608299 610 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AC019193.3-201ENST00000609144 554 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 AC009248.2-201ENST00000619826 254 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 MIR8065-201ENST00000620577 100 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 MIR8054-201ENST00000620877 86 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.92□□□□□ -2.26
SEMA3DO95025 AC068647.2-201ENST00000637380 353 ntBASIC0.92□□□□□ -2.26
SEMA3DO95025 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SEMA3DO95025 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SEMA3DO95025 RNY3P3-201ENST00000363816 102 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 RNU6-306P-201ENST00000384617 107 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 RNU6-541P-201ENST00000384709 110 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 SNORA12.1-201ENST00000390873 148 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 MTND1P1-201ENST00000445453 368 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.91□□□□□ -2.26
SEMA3DO95025 ACA59.1-201ENST00000515966 143 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 AL390123.1-201ENST00000603216 237 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.91□□□□□ -2.26
SEMA3DO95025 Y_RNA.135-201ENST00000363439 95 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 U3.8-201ENST00000363675 217 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 RNU1-124P-201ENST00000363861 145 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 Y_RNA.212-201ENST00000364177 102 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 RNU4-75P-201ENST00000364621 146 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 Y_RNA.530-201ENST00000384587 101 ntBASIC0.9□□□□□ -2.27
SEMA3DO95025 RNU6-440P-201ENST00000390882 105 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms