Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC093023.1-201ENST00000547375 507 ntBASIC1.81□□□□□ -2.12
BEST1O76090 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.81□□□□□ -2.12
BEST1O76090 MIR3683-201ENST00000580847 82 ntBASIC1.81□□□□□ -2.12
BEST1O76090 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
BEST1O76090 RNU6-222P-201ENST00000362438 107 ntBASIC1.8□□□□□ -2.12
BEST1O76090 RNU6-1266P-201ENST00000362794 105 ntBASIC1.8□□□□□ -2.12
BEST1O76090 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.8□□□□□ -2.12
BEST1O76090 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
BEST1O76090 RNU6-331P-201ENST00000384724 107 ntBASIC1.8□□□□□ -2.12
BEST1O76090 AC138393.2-201ENST00000414742 246 ntBASIC1.8□□□□□ -2.12
BEST1O76090 AL353997.1-201ENST00000432936 108 ntBASIC1.8□□□□□ -2.12
BEST1O76090 RPL23AP50-201ENST00000434149 455 ntBASIC1.8□□□□□ -2.12
BEST1O76090 AC098614.3-201ENST00000438957 440 ntBASIC1.8□□□□□ -2.12
BEST1O76090 SNORD13-201ENST00000459299 104 ntBASIC1.8□□□□□ -2.12
BEST1O76090 RPL26P26-201ENST00000480251 434 ntBASIC1.8□□□□□ -2.12
BEST1O76090 RPL17P19-201ENST00000489069 552 ntBASIC1.8□□□□□ -2.12
BEST1O76090 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
BEST1O76090 SNORA20.3-201ENST00000516880 132 ntBASIC1.8□□□□□ -2.12
BEST1O76090 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
BEST1O76090 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.8□□□□□ -2.12
BEST1O76090 HSBP1P1-201ENST00000555205 166 ntBASIC1.8□□□□□ -2.12
BEST1O76090 MIR4769-201ENST00000584126 77 ntBASIC1.8□□□□□ -2.12
BEST1O76090 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.8□□□□□ -2.12
BEST1O76090 AC092794.2-201ENST00000620933 563 ntBASIC1.8□□□□□ -2.12
BEST1O76090 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.8□□□□□ -2.12
BEST1O76090 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
BEST1O76090 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
BEST1O76090 RNA5SP432-201ENST00000362480 116 ntBASIC1.79□□□□□ -2.12
BEST1O76090 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
BEST1O76090 Y_RNA.595-201ENST00000410403 105 ntBASIC1.79□□□□□ -2.12
BEST1O76090 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.79□□□□□ -2.12
BEST1O76090 TOMM22P2-201ENST00000430735 237 ntBASIC1.79□□□□□ -2.12
BEST1O76090 MTND4P18-201ENST00000447010 465 ntBASIC1.79□□□□□ -2.12
BEST1O76090 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.79□□□□□ -2.12
BEST1O76090 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.79□□□□□ -2.12
BEST1O76090 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.79□□□□□ -2.12
BEST1O76090 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
BEST1O76090 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.79□□□□□ -2.12
BEST1O76090 MIR5690-201ENST00000583739 73 ntBASIC1.79□□□□□ -2.12
BEST1O76090 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
BEST1O76090 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.79□□□□□ -2.12
BEST1O76090 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
BEST1O76090 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
BEST1O76090 RNA5SP323-201ENST00000391094 133 ntBASIC1.78□□□□□ -2.12
BEST1O76090 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
BEST1O76090 MIR1267-201ENST00000408723 78 ntBASIC1.78□□□□□ -2.12
BEST1O76090 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
BEST1O76090 JTBP1-201ENST00000441314 247 ntBASIC1.78□□□□□ -2.12
BEST1O76090 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.78□□□□□ -2.12
BEST1O76090 snoU13.9-201ENST00000458927 103 ntBASIC1.78□□□□□ -2.12
BEST1O76090 RNU7-87P-201ENST00000459343 62 ntBASIC1.78□□□□□ -2.12
BEST1O76090 HMGN1P12-201ENST00000499125 195 ntBASIC1.78□□□□□ -2.12
BEST1O76090 SCARNA16.2-201ENST00000516520 172 ntBASIC1.78□□□□□ -2.12
BEST1O76090 RNU1-142P-201ENST00000516682 145 ntBASIC1.78□□□□□ -2.12
BEST1O76090 AC004584.2-201ENST00000570407 410 ntBASIC1.78□□□□□ -2.12
BEST1O76090 AC022432.1-201ENST00000595739 310 ntBASIC1.78□□□□□ -2.12
BEST1O76090 AC016727.1-205ENST00000605437 569 ntBASIC1.78□□□□□ -2.12
BEST1O76090 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.78□□□□□ -2.12
BEST1O76090 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.78□□□□□ -2.12
BEST1O76090 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.78□□□□□ -2.12
BEST1O76090 AL669831.3-213ENST00000636676 183 ntBASIC1.78□□□□□ -2.12
BEST1O76090 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
BEST1O76090 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
BEST1O76090 Y_RNA.557-201ENST00000384680 107 ntBASIC1.77□□□□□ -2.13
BEST1O76090 MIR329-1-201ENST00000385028 80 ntBASIC1.77□□□□□ -2.13
BEST1O76090 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
BEST1O76090 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.77□□□□□ -2.13
BEST1O76090 APOOP3-201ENST00000536787 586 ntBASIC1.77□□□□□ -2.13
BEST1O76090 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
BEST1O76090 AL137100.2-201ENST00000555786 315 ntBASIC1.77□□□□□ -2.13
BEST1O76090 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.77□□□□□ -2.13
BEST1O76090 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
BEST1O76090 AL359075.3-201ENST00000613288 217 ntBASIC1.77□□□□□ -2.13
BEST1O76090 AC025253.1-201ENST00000613623 543 ntBASIC1.77□□□□□ -2.13
BEST1O76090 AL353997.5-201ENST00000618886 171 ntBASIC1.77□□□□□ -2.13
BEST1O76090 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.77□□□□□ -2.13
BEST1O76090 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
BEST1O76090 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
BEST1O76090 RNA5SP467-201ENST00000391274 118 ntBASIC1.76□□□□□ -2.13
BEST1O76090 AC092423.1-201ENST00000430165 186 ntBASIC1.76□□□□□ -2.13
BEST1O76090 AC073910.1-201ENST00000445047 438 ntBASIC1.76□□□□□ -2.13
BEST1O76090 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.76□□□□□ -2.13
BEST1O76090 AC074133.1-201ENST00000515696 183 ntBASIC1.76□□□□□ -2.13
BEST1O76090 RNU6-107P-201ENST00000516643 102 ntBASIC1.76□□□□□ -2.13
BEST1O76090 SNORA77B-201ENST00000578179 125 ntBASIC1.76□□□□□ -2.13
BEST1O76090 MIR3684-201ENST00000579779 74 ntBASIC1.76□□□□□ -2.13
BEST1O76090 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
BEST1O76090 AC125232.2-201ENST00000592457 143 ntBASIC1.76□□□□□ -2.13
BEST1O76090 AC016925.2-201ENST00000605108 242 ntBASIC1.76□□□□□ -2.13
BEST1O76090 AL355073.2-201ENST00000612106 557 ntBASIC1.76□□□□□ -2.13
BEST1O76090 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.76□□□□□ -2.13
BEST1O76090 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.76□□□□□ -2.13
BEST1O76090 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
BEST1O76090 RNU6-874P-201ENST00000362390 105 ntBASIC1.75□□□□□ -2.13
BEST1O76090 SNORA33-201ENST00000363664 130 ntBASIC1.75□□□□□ -2.13
BEST1O76090 RNU6-338P-201ENST00000383888 105 ntBASIC1.75□□□□□ -2.13
BEST1O76090 RNU6-1145P-201ENST00000384246 107 ntBASIC1.75□□□□□ -2.13
BEST1O76090 RNU4-14P-201ENST00000410858 122 ntBASIC1.75□□□□□ -2.13
BEST1O76090 RNU6-370P-201ENST00000411008 104 ntBASIC1.75□□□□□ -2.13
BEST1O76090 RNU6-1001P-201ENST00000411265 100 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms