Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AL512310.8-201ENST00000550183 120 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 MIR3942-201ENST00000585264 109 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 AC080013.6-201ENST00000606185 215 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 AC009033.1-201ENST00000624279 431 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 AC090617.10-201ENST00000624308 134 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 RNA5SP259-201ENST00000365541 109 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 SNORD116-11-201ENST00000383882 92 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 MIR181A1-201ENST00000385026 110 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UPK3AO75631 RNU6-373P-201ENST00000411247 98 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 MTATP6P13-201ENST00000438531 667 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 PGBD4P5-201ENST00000445958 426 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 RNU6-221P-201ENST00000459541 99 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 RPL30P10-201ENST00000488148 337 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 AC005840.1-201ENST00000498412 377 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK3AO75631 RN7SKP88-201ENST00000516847 250 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.11□□□□□ -2.23
UPK3AO75631 AC027288.2-201ENST00000553028 243 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 7SK.8-201ENST00000612110 250 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
UPK3AO75631 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK3AO75631 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
UPK3AO75631 MTND4P12-201ENST00000498999 1377 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 Y_RNA.9-201ENST00000362354 101 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 RPL21P1-201ENST00000399532 476 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3AO75631 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.1□□□□□ -2.23
UPK3AO75631 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3AO75631 RNU1-142P-201ENST00000516682 145 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3AO75631 UBL5P4-201ENST00000562584 236 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 7SK.7-201ENST00000603504 247 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.1□□□□□ -2.23
UPK3AO75631 AC009248.2-201ENST00000619826 254 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 AC100810.6-201ENST00000638068 285 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 AC091812.1-201ENST00000432235 1948 ntBASIC1.1□□□□□ -2.23
UPK3AO75631 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 Y_RNA.327-201ENST00000365201 102 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 Y_RNA.415-201ENST00000384012 112 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 Y_RNA.554-201ENST00000384672 102 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AC010154.1-201ENST00000425857 269 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AC005002.2-201ENST00000438228 269 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AC091179.3-201ENST00000474761 144 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3AO75631 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3AO75631 MIR4742-201ENST00000581069 85 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 MIR4273-201ENST00000582824 84 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AL929325.1-201ENST00000603096 117 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 MZT1P2-201ENST00000604387 248 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 AL359075.3-201ENST00000613288 217 ntBASIC1.09□□□□□ -2.23
UPK3AO75631 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
UPK3AO75631 RNY4P14-201ENST00000363656 96 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 U3.8-201ENST00000363675 217 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 RNU4-12P-201ENST00000365233 139 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
UPK3AO75631 RNU6-159P-201ENST00000391080 106 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 AC009161.1-201ENST00000417306 376 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK3AO75631 AL606517.2-201ENST00000442855 241 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 RNU6-1314P-201ENST00000517139 104 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK3AO75631 AK6P2-201ENST00000549020 471 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK3AO75631 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
UPK3AO75631 RNU6-1266P-201ENST00000362794 105 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 Y_RNA.89-201ENST00000363031 102 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 RNU6-280P-201ENST00000364145 104 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.07□□□□□ -2.24
UPK3AO75631 Y_RNA.450-201ENST00000384198 113 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 RNU6-793P-201ENST00000384233 104 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 RNU6-17P-201ENST00000384245 107 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 RNU6-18P-201ENST00000384527 107 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 Y_RNA.533-201ENST00000384596 114 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 MIR1185-2-201ENST00000408687 86 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.07□□□□□ -2.24
UPK3AO75631 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.07□□□□□ -2.24
UPK3AO75631 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 AC134698.4-201ENST00000523451 826 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.07□□□□□ -2.24
UPK3AO75631 MIR5696-201ENST00000578474 85 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 AL050343.2-201ENST00000607338 280 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 U6.108-201ENST00000637764 58 ntBASIC1.07□□□□□ -2.24
UPK3AO75631 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UPK3AO75631 RNU6-137P-201ENST00000363680 108 ntBASIC1.06□□□□□ -2.24
UPK3AO75631 RNU6-1059P-201ENST00000363752 98 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms