Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TRIM3O75382 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM3O75382 RNU6-222P-201ENST00000362438 107 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 SNORA4.2-201ENST00000365313 147 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 MIR10B-201ENST00000385011 110 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 RNU6-360P-201ENST00000390944 104 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.35□□□□□ -2.19
TRIM3O75382 RPS3AP52-201ENST00000435639 297 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM3O75382 RNU6-221P-201ENST00000459541 99 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 AC099513.1-201ENST00000490423 301 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 AC026782.1-201ENST00000512952 449 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM3O75382 RNU6-1146P-201ENST00000516282 102 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 AC134698.4-201ENST00000523451 826 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.35□□□□□ -2.19
TRIM3O75382 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 SNORA77B-201ENST00000578179 125 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 AC018462.2-201ENST00000605375 395 ntBASIC1.35□□□□□ -2.19
TRIM3O75382 Y_RNA.2-201ENST00000362330 96 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 Y_RNA.179-201ENST00000363844 90 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 RNU6-280P-201ENST00000364145 104 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 RNU6-793P-201ENST00000384233 104 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM3O75382 MIR548K-201ENST00000408406 116 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 MTND3P8-201ENST00000412909 339 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
TRIM3O75382 MTND3P23-201ENST00000431980 347 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM3O75382 RNU7-95P-201ENST00000459222 64 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 RNA5SP445-201ENST00000515889 115 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 RNU6-358P-201ENST00000516564 75 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 AC011712.1-201ENST00000588959 234 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 AC060780.3-201ENST00000589464 80 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 AC098679.4-201ENST00000624241 654 ntBASIC1.34□□□□□ -2.19
TRIM3O75382 Y_RNA.106-201ENST00000363189 100 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 RNU6-137P-201ENST00000363680 108 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 RNU6-1240P-201ENST00000365155 104 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 RNA5SP323-201ENST00000391094 133 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 MIR1185-2-201ENST00000408687 86 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 USMG5P1-201ENST00000425964 177 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM3O75382 RPS26P55-201ENST00000471178 356 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM3O75382 Y_RNA.670-201ENST00000516255 105 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 RNU6-1016P-201ENST00000516689 94 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 RNA5SP481-201ENST00000516814 122 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 Y_RNA.706-201ENST00000516933 99 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM3O75382 AC080078.2-201ENST00000603766 501 ntBASIC1.33□□□□□ -2.2
TRIM3O75382 MTND5P16-201ENST00000460269 1703 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRIM3O75382 U3.8-201ENST00000363675 217 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 RNU6-203P-201ENST00000384038 104 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 RNA5SP109-201ENST00000391010 116 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 Y_RNA.594-201ENST00000410373 140 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 RNU6-1050P-201ENST00000410388 107 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 Y_RNA.595-201ENST00000410403 105 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC074085.1-201ENST00000413598 418 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC008134.1-201ENST00000420943 193 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 USP9YP16-201ENST00000430287 407 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AL353997.1-201ENST00000432936 108 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC005002.2-201ENST00000438228 269 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC069257.2-201ENST00000441819 155 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 USP9YP23-201ENST00000455085 407 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AL163195.1-201ENST00000496941 348 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.32□□□□□ -2.2
TRIM3O75382 RNU6-107P-201ENST00000516643 102 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 MTND4LP26-201ENST00000518144 282 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC100812.1-201ENST00000607622 580 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC005014.2-201ENST00000607795 599 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 AC010999.1-201ENST00000611856 324 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.32□□□□□ -2.2
TRIM3O75382 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 ICE2P2-201ENST00000483823 2787 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
TRIM3O75382 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 Y_RNA.490-201ENST00000384413 102 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM3O75382 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM3O75382 AC107399.1-201ENST00000451226 265 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 snoU13.27-201ENST00000459278 104 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 RNU7-87P-201ENST00000459343 62 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 HMGN1P12-201ENST00000499125 195 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 AC091144.1-201ENST00000519573 138 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.31□□□□□ -2.2
TRIM3O75382 AC093023.1-201ENST00000547375 507 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.31□□□□□ -2.2
TRIM3O75382 FRG2DP-202ENST00000566967 323 ntBASIC1.31□□□□□ -2.2
TRIM3O75382 MIR4498-201ENST00000577599 66 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms