Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MTND1P15-201ENST00000579262 949 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AC137590.2-201ENST00000619709 240 ntBASIC0.85□□□□□ -2.27
BRD4O60885 AL627230.5-201ENST00000619807 58 ntBASIC0.85□□□□□ -2.27
BRD4O60885 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.85□□□□□ -2.27
BRD4O60885 FER-210ENST00000628534 558 ntTSL 5 BASIC0.85□□□□□ -2.27
BRD4O60885 RNU5B-2P-201ENST00000363036 113 ntBASIC0.84□□□□□ -2.27
BRD4O60885 VTRNA1-3-201ENST00000365645 89 ntBASIC0.84□□□□□ -2.27
BRD4O60885 RNU6-1286P-201ENST00000383871 107 ntBASIC0.84□□□□□ -2.27
BRD4O60885 RNU6-259P-201ENST00000383999 107 ntBASIC0.84□□□□□ -2.27
BRD4O60885 RNU6-1119P-201ENST00000384349 108 ntBASIC0.84□□□□□ -2.27
BRD4O60885 MIR521-1-201ENST00000384902 87 ntBASIC0.84□□□□□ -2.27
BRD4O60885 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
BRD4O60885 MIR450B-201ENST00000401182 78 ntBASIC0.84□□□□□ -2.27
BRD4O60885 TIMM9P3-201ENST00000428659 274 ntBASIC0.84□□□□□ -2.27
BRD4O60885 MTCO3P29-201ENST00000432119 779 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.84□□□□□ -2.27
BRD4O60885 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.84□□□□□ -2.27
BRD4O60885 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.84□□□□□ -2.27
BRD4O60885 AC069257.2-201ENST00000441819 155 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AC074290.1-201ENST00000448883 135 ntBASIC0.84□□□□□ -2.27
BRD4O60885 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.84□□□□□ -2.27
BRD4O60885 RNU2-34P-201ENST00000516534 121 ntBASIC0.84□□□□□ -2.27
BRD4O60885 RNU6-1332P-201ENST00000516666 104 ntBASIC0.84□□□□□ -2.27
BRD4O60885 RNU11-2P-201ENST00000516898 142 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AC136628.3-201ENST00000521868 290 ntBASIC0.84□□□□□ -2.27
BRD4O60885 MRPS36P4-201ENST00000534436 298 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AC026371.1-201ENST00000551867 419 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AL118558.2-201ENST00000556294 238 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AL158211.1-201ENST00000566763 763 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AC092807.2-201ENST00000609367 243 ntBASIC0.84□□□□□ -2.27
BRD4O60885 MIR8076-201ENST00000611401 83 ntBASIC0.84□□□□□ -2.27
BRD4O60885 MIR2909-201ENST00000617113 69 ntBASIC0.84□□□□□ -2.27
BRD4O60885 AC124864.2-201ENST00000624736 186 ntBASIC0.84□□□□□ -2.27
BRD4O60885 OR5AK4P-201ENST00000635912 903 ntBASIC0.84□□□□□ -2.27
BRD4O60885 MIR548B-201ENST00000385247 97 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC060773.1-201ENST00000421698 310 ntBASIC0.83□□□□□ -2.28
BRD4O60885 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.83□□□□□ -2.28
BRD4O60885 RNU6-1208P-201ENST00000459588 107 ntBASIC0.83□□□□□ -2.28
BRD4O60885 MTCO1P29-201ENST00000496868 288 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC107401.1-201ENST00000503426 685 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC011406.1-201ENST00000512440 370 ntBASIC0.83□□□□□ -2.28
BRD4O60885 RNU6-1146P-201ENST00000516282 102 ntBASIC0.83□□□□□ -2.28
BRD4O60885 RN7SKP88-201ENST00000516847 250 ntBASIC0.83□□□□□ -2.28
BRD4O60885 RNU6-856P-201ENST00000516959 98 ntBASIC0.83□□□□□ -2.28
BRD4O60885 MTND1P35-201ENST00000526739 508 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
BRD4O60885 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.83□□□□□ -2.28
BRD4O60885 SNORA59B-202ENST00000578183 701 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC100830.2-201ENST00000581636 240 ntBASIC0.83□□□□□ -2.28
BRD4O60885 MIR3976-201ENST00000606807 139 ntBASIC0.83□□□□□ -2.28
BRD4O60885 7SK.8-201ENST00000612110 250 ntBASIC0.83□□□□□ -2.28
BRD4O60885 7SK.11-201ENST00000615477 250 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC126177.8-201ENST00000618339 1015 ntBASIC0.83□□□□□ -2.28
BRD4O60885 7SK.13-201ENST00000622040 250 ntBASIC0.83□□□□□ -2.28
BRD4O60885 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.83□□□□□ -2.28
BRD4O60885 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.83□□□□□ -2.28
BRD4O60885 BX322639.1-202ENST00000423987 2213 ntBASIC0.83□□□□□ -2.28
BRD4O60885 MTND5P26-201ENST00000426018 1752 ntBASIC0.83□□□□□ -2.28
BRD4O60885 MTND4P5-201ENST00000435821 1374 ntBASIC0.83□□□□□ -2.28
BRD4O60885 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
BRD4O60885 RNA5SP499-201ENST00000363982 119 ntBASIC0.83□□□□□ -2.28
BRD4O60885 Y_RNA.274-201ENST00000364714 101 ntBASIC0.83□□□□□ -2.28
BRD4O60885 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
BRD4O60885 MTCO3P40-201ENST00000392516 676 ntBASIC0.83□□□□□ -2.28
BRD4O60885 RNU6-325P-201ENST00000411132 105 ntBASIC0.83□□□□□ -2.28
BRD4O60885 RPS26P42-201ENST00000413485 326 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.83□□□□□ -2.28
BRD4O60885 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.83□□□□□ -2.28
BRD4O60885 AL353572.1-201ENST00000442490 417 ntBASIC0.83□□□□□ -2.28
BRD4O60885 NFU1P2-201ENST00000448700 469 ntBASIC0.83□□□□□ -2.28
BRD4O60885 TPT1P7-201ENST00000458300 517 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC007215.1-201ENST00000464893 276 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.83□□□□□ -2.28
BRD4O60885 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
BRD4O60885 RNA5SP437-201ENST00000517249 129 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.83□□□□□ -2.28
BRD4O60885 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.83□□□□□ -2.28
BRD4O60885 AL512360.1-201ENST00000555346 234 ntBASIC0.83□□□□□ -2.28
BRD4O60885 CPDP1-201ENST00000579660 283 ntBASIC0.83□□□□□ -2.28
BRD4O60885 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.83□□□□□ -2.28
BRD4O60885 RMST_3.1-201ENST00000611651 109 ntBASIC0.83□□□□□ -2.28
BRD4O60885 Z99129.1-201ENST00000612510 255 ntBASIC0.83□□□□□ -2.28
BRD4O60885 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.83□□□□□ -2.28
BRD4O60885 AC068792.1-201ENST00000621354 417 ntBASIC0.83□□□□□ -2.28
BRD4O60885 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
BRD4O60885 RNU6-1305P-201ENST00000364353 104 ntBASIC0.82□□□□□ -2.28
BRD4O60885 Y_RNA.373-201ENST00000365600 103 ntBASIC0.82□□□□□ -2.28
BRD4O60885 RNU4-20P-201ENST00000365601 151 ntBASIC0.82□□□□□ -2.28
BRD4O60885 RNU6-975P-201ENST00000384296 105 ntBASIC0.82□□□□□ -2.28
BRD4O60885 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
BRD4O60885 MIR1253-201ENST00000408273 105 ntBASIC0.82□□□□□ -2.28
BRD4O60885 COX6CP10-201ENST00000416832 224 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.82□□□□□ -2.28
BRD4O60885 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.82□□□□□ -2.28
BRD4O60885 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.82□□□□□ -2.28
BRD4O60885 AC073910.1-201ENST00000445047 438 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AC009237.7-201ENST00000447357 229 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AC016717.1-201ENST00000448918 286 ntBASIC0.82□□□□□ -2.28
BRD4O60885 MTCO3P8-201ENST00000453691 755 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms