Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM13O60858 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 RNU6-748P-201ENST00000384648 107 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 RNU6-19P-201ENST00000384718 107 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 MIRLET7F2-201ENST00000385277 83 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 SNORA12.1-201ENST00000390873 148 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 SNORA79-201ENST00000408376 140 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 RNA5SP201-201ENST00000410316 124 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 CYCSP19-201ENST00000411715 316 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 SNRPGP8-201ENST00000454064 226 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 AL441985.1-201ENST00000457727 251 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 RPS26P45-201ENST00000471748 340 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM13O60858 RNU5F-2P-201ENST00000516066 82 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 RN7SKP43-201ENST00000516173 320 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 RNU7-115P-201ENST00000516433 55 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM13O60858 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM13O60858 AC091178.2-201ENST00000584401 117 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM13O60858 RPL30P11-203ENST00000598995 310 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 AC091152.3-201ENST00000604227 325 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 AL034555.1-201ENST00000604816 211 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 TCL6_2.1-201ENST00000615162 119 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 AC106754.2-201ENST00000623006 233 ntBASIC3.11□□□□□ -1.91
TRIM13O60858 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TRIM13O60858 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM13O60858 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM13O60858 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
TRIM13O60858 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM13O60858 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM13O60858 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM13O60858 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM13O60858 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRIM13O60858 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 SNORA36B-201ENST00000410438 131 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 RNU2-49P-201ENST00000410666 184 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM13O60858 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM13O60858 AC091390.1-201ENST00000433904 331 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 AC004386.2-201ENST00000441858 148 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 AC006483.1-201ENST00000487308 313 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 AC117454.1-201ENST00000491120 168 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 RNU6-781P-201ENST00000516377 101 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 RNU1-117P-201ENST00000517041 158 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 AC027176.1-201ENST00000560204 514 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM13O60858 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM13O60858 PCGEM1.1-201ENST00000613431 131 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
TRIM13O60858 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM13O60858 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM13O60858 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TRIM13O60858 RNU6-647P-201ENST00000364243 107 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 U8.6-201ENST00000364939 135 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 RNU6-106P-201ENST00000384405 107 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 RNU6-905P-201ENST00000384434 107 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM13O60858 AL603914.1-201ENST00000401964 204 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM13O60858 AL365496.1-201ENST00000426885 215 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 AC027124.2-201ENST00000428249 105 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 HSPE1P21-201ENST00000438283 308 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 Z75741.1-201ENST00000446793 314 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 Y_RNA.649-201ENST00000459077 103 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM13O60858 RNU6-197P-201ENST00000516680 100 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM13O60858 AC025281.1-201ENST00000567026 265 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 RNU6-91P-201ENST00000607774 107 ntBASIC3.09□□□□□ -1.91
TRIM13O60858 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.09□□□□□ -1.92
TRIM13O60858 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM13O60858 AL161912.2-201ENST00000565707 3007 ntBASIC3.09□□□□□ -1.92
TRIM13O60858 AC010889.1-201ENST00000566193 2666 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM13O60858 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM13O60858 SNORA67.2-201ENST00000384300 149 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 MIR548A1-201ENST00000385041 97 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 RNU6-750P-201ENST00000390946 107 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 RNU6ATAC-201ENST00000408749 126 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 RNY4P29-201ENST00000410801 97 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 GOT2P5-201ENST00000433995 546 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 MIR4697-201ENST00000582977 78 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 AC131055.1-201ENST00000584626 316 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 AC006133.1-201ENST00000617106 264 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM13O60858 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM13O60858 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
TRIM13O60858 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM13O60858 SNORD114-19-201ENST00000363072 75 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 U3.8-201ENST00000363675 217 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 RNU6-640P-201ENST00000363693 105 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 Y_RNA.346-201ENST00000365385 112 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 Y_RNA.348-201ENST00000365403 103 ntBASIC3.07□□□□□ -1.92
TRIM13O60858 Y_RNA.388-201ENST00000383919 113 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms