Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Y_RNA.149-201ENST00000363558 117 ntBASIC2□□□□□ -2.09
PRKNO60260 Y_RNA.214-201ENST00000364201 112 ntBASIC2□□□□□ -2.09
PRKNO60260 SNORA25B-201ENST00000365507 128 ntBASIC2□□□□□ -2.09
PRKNO60260 Y_RNA.498-201ENST00000384460 102 ntBASIC2□□□□□ -2.09
PRKNO60260 Y_RNA.574-201ENST00000384766 95 ntBASIC2□□□□□ -2.09
PRKNO60260 SNORA11.4-201ENST00000408823 129 ntBASIC2□□□□□ -2.09
PRKNO60260 RNU2-48P-201ENST00000410694 191 ntBASIC2□□□□□ -2.09
PRKNO60260 ELOCP21-201ENST00000412558 336 ntBASIC2□□□□□ -2.09
PRKNO60260 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2□□□□□ -2.09
PRKNO60260 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2□□□□□ -2.09
PRKNO60260 HMGN2P18-201ENST00000450680 270 ntBASIC2□□□□□ -2.09
PRKNO60260 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2□□□□□ -2.09
PRKNO60260 RNU6-625P-201ENST00000459412 107 ntBASIC2□□□□□ -2.09
PRKNO60260 RPL26P26-201ENST00000480251 434 ntBASIC2□□□□□ -2.09
PRKNO60260 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2□□□□□ -2.09
PRKNO60260 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2□□□□□ -2.09
PRKNO60260 RNU6-991P-201ENST00000516168 107 ntBASIC2□□□□□ -2.09
PRKNO60260 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
PRKNO60260 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
PRKNO60260 RNA5SP490-201ENST00000517141 136 ntBASIC2□□□□□ -2.09
PRKNO60260 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2□□□□□ -2.09
PRKNO60260 AC018448.1-201ENST00000552843 316 ntBASIC2□□□□□ -2.09
PRKNO60260 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2□□□□□ -2.09
PRKNO60260 AC009127.3-201ENST00000570531 403 ntBASIC2□□□□□ -2.09
PRKNO60260 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2□□□□□ -2.09
PRKNO60260 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2□□□□□ -2.09
PRKNO60260 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2□□□□□ -2.09
PRKNO60260 AC068205.3-201ENST00000636385 468 ntBASIC2□□□□□ -2.09
PRKNO60260 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
PRKNO60260 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PRKNO60260 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
PRKNO60260 RNU6-806P-201ENST00000365147 105 ntBASIC1.99□□□□□ -2.09
PRKNO60260 RNU6-438P-201ENST00000365561 103 ntBASIC1.99□□□□□ -2.09
PRKNO60260 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.99□□□□□ -2.09
PRKNO60260 RNU6-611P-201ENST00000384276 104 ntBASIC1.99□□□□□ -2.09
PRKNO60260 SNORA67.2-201ENST00000384300 149 ntBASIC1.99□□□□□ -2.09
PRKNO60260 Y_RNA.512-201ENST00000384518 102 ntBASIC1.99□□□□□ -2.09
PRKNO60260 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
PRKNO60260 RPL21P1-201ENST00000399532 476 ntBASIC1.99□□□□□ -2.09
PRKNO60260 AL357139.1-201ENST00000407792 426 ntBASIC1.99□□□□□ -2.09
PRKNO60260 RN7SKP192-201ENST00000411291 327 ntBASIC1.99□□□□□ -2.09
PRKNO60260 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PRKNO60260 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.99□□□□□ -2.09
PRKNO60260 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.99□□□□□ -2.09
PRKNO60260 IPO7P1-201ENST00000442031 636 ntBASIC1.99□□□□□ -2.09
PRKNO60260 AC009238.1-201ENST00000442165 424 ntBASIC1.99□□□□□ -2.09
PRKNO60260 DYNLT3P2-201ENST00000442517 295 ntBASIC1.99□□□□□ -2.09
PRKNO60260 AC009237.6-201ENST00000446969 424 ntBASIC1.99□□□□□ -2.09
PRKNO60260 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
PRKNO60260 AC074133.1-201ENST00000515696 183 ntBASIC1.99□□□□□ -2.09
PRKNO60260 Y_RNA.713-201ENST00000517013 96 ntBASIC1.99□□□□□ -2.09
PRKNO60260 RNA5SP402-201ENST00000517148 110 ntBASIC1.99□□□□□ -2.09
PRKNO60260 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.99□□□□□ -2.09
PRKNO60260 CYCSP23-201ENST00000519781 313 ntBASIC1.99□□□□□ -2.09
PRKNO60260 PRELID2P1-201ENST00000552837 301 ntBASIC1.99□□□□□ -2.09
PRKNO60260 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.99□□□□□ -2.09
PRKNO60260 AC233702.2-202ENST00000562547 291 ntBASIC1.99□□□□□ -2.09
PRKNO60260 MIR4503-201ENST00000582187 83 ntBASIC1.99□□□□□ -2.09
PRKNO60260 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
PRKNO60260 AC130454.1-201ENST00000622948 401 ntBASIC1.99□□□□□ -2.09
PRKNO60260 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.99□□□□□ -2.09
PRKNO60260 ZNF720P1-201ENST00000562403 1939 ntBASIC1.99□□□□□ -2.09
PRKNO60260 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.19-201ENST00000362462 99 ntBASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.26-201ENST00000362539 101 ntBASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.64-201ENST00000362845 102 ntBASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.105-201ENST00000363182 111 ntBASIC1.98□□□□□ -2.09
PRKNO60260 RNU6-626P-201ENST00000363354 107 ntBASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.176-201ENST00000363815 109 ntBASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.183-201ENST00000363882 113 ntBASIC1.98□□□□□ -2.09
PRKNO60260 RNU6-770P-201ENST00000363929 105 ntBASIC1.98□□□□□ -2.09
PRKNO60260 RNU6-20P-201ENST00000384106 107 ntBASIC1.98□□□□□ -2.09
PRKNO60260 Y_RNA.452-201ENST00000384202 108 ntBASIC1.98□□□□□ -2.09
PRKNO60260 RNU6-937P-201ENST00000384325 106 ntBASIC1.98□□□□□ -2.09
PRKNO60260 RNU6-1109P-201ENST00000391187 107 ntBASIC1.98□□□□□ -2.09
PRKNO60260 MIR1283-1-201ENST00000408494 87 ntBASIC1.98□□□□□ -2.09
PRKNO60260 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKNO60260 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKNO60260 RAB28P5-201ENST00000427490 651 ntBASIC1.98□□□□□ -2.09
PRKNO60260 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKNO60260 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.98□□□□□ -2.09
PRKNO60260 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.98□□□□□ -2.09
PRKNO60260 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
PRKNO60260 HMGN2P9-201ENST00000476875 229 ntBASIC1.98□□□□□ -2.09
PRKNO60260 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKNO60260 SNORA4.4-201ENST00000515921 135 ntBASIC1.98□□□□□ -2.09
PRKNO60260 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.98□□□□□ -2.09
PRKNO60260 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.98□□□□□ -2.09
PRKNO60260 AK6P2-201ENST00000549020 471 ntBASIC1.98□□□□□ -2.09
PRKNO60260 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.98□□□□□ -2.09
PRKNO60260 AC136932.1-201ENST00000574771 208 ntBASIC1.98□□□□□ -2.09
PRKNO60260 MIR3149-201ENST00000584629 83 ntBASIC1.98□□□□□ -2.09
PRKNO60260 MIR4753-201ENST00000585119 83 ntBASIC1.98□□□□□ -2.09
PRKNO60260 AC025754.2-201ENST00000606491 432 ntBASIC1.98□□□□□ -2.09
PRKNO60260 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.98□□□□□ -2.09
PRKNO60260 U4atac.1-201ENST00000618345 95 ntBASIC1.98□□□□□ -2.09
PRKNO60260 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.98□□□□□ -2.09
PRKNO60260 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.98□□□□□ -2.09
PRKNO60260 AC005336.3-201ENST00000623833 2679 ntBASIC1.97□□□□□ -2.09
PRKNO60260 SNORD31B-201ENST00000364977 69 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms