Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CALM2P3-201ENST00000400429 449 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.89□□□□□ -2.27
CLOCKO15516 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.89□□□□□ -2.27
CLOCKO15516 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.89□□□□□ -2.27
CLOCKO15516 RNU7-94P-201ENST00000459576 63 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 SNORA31.4-201ENST00000516049 129 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 SNORA25.14-201ENST00000516481 132 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.89□□□□□ -2.27
CLOCKO15516 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
CLOCKO15516 OSBPL9P5-201ENST00000542581 171 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 AC006504.8-201ENST00000621046 635 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 RNU6-1266P-201ENST00000362794 105 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 Y_RNA.231-201ENST00000364358 102 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 RNU6-522P-201ENST00000364497 107 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 SNORD87-201ENST00000364849 89 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 Y_RNA.359-201ENST00000365498 102 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 MIR660-201ENST00000385235 97 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 SNORA12.1-201ENST00000390873 148 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.88□□□□□ -2.27
CLOCKO15516 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.88□□□□□ -2.27
CLOCKO15516 RNU7-187P-201ENST00000458985 68 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 AC083904.1-201ENST00000487828 231 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 AC010424.1-201ENST00000506336 297 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 SNORA31.2-201ENST00000516019 134 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.88□□□□□ -2.27
CLOCKO15516 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.88□□□□□ -2.27
CLOCKO15516 AC006362.1-201ENST00000567392 174 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
CLOCKO15516 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.88□□□□□ -2.27
CLOCKO15516 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 AC097520.1-201ENST00000624435 385 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.88□□□□□ -2.27
CLOCKO15516 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CLOCKO15516 ELL2P3-201ENST00000457883 1602 ntBASIC0.88□□□□□ -2.27
CLOCKO15516 RNU4-79P-201ENST00000362764 141 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 Y_RNA.77-201ENST00000362962 107 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RNU6-254P-201ENST00000363377 107 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RNU6-137P-201ENST00000363680 108 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RNU4-76P-201ENST00000364509 141 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 Y_RNA.319-201ENST00000365138 92 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RNU6-790P-201ENST00000384479 105 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 MIR153-2-201ENST00000385225 87 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.87□□□□□ -2.27
CLOCKO15516 Z82188.1-201ENST00000436709 154 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.87□□□□□ -2.27
CLOCKO15516 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.87□□□□□ -2.27
CLOCKO15516 AK6P2-201ENST00000549020 471 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 AL158211.1-201ENST00000566763 763 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 FRG2DP-202ENST00000566967 323 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RNU6-89P-201ENST00000606519 100 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 GHRLOS.1-201ENST00000610995 70 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RMST_2.1-201ENST00000617263 136 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 AC106754.2-201ENST00000623006 233 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 AC090582.1-201ENST00000636321 199 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 MIR6767-201ENST00000637302 66 ntBASIC0.87□□□□□ -2.27
CLOCKO15516 RNU6-1085P-201ENST00000363576 107 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 MIR489-201ENST00000384923 84 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 RNU6-910P-201ENST00000390844 107 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.86□□□□□ -2.27
CLOCKO15516 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.86□□□□□ -2.27
CLOCKO15516 PCMTD1P1-201ENST00000455560 355 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 AC048334.1-201ENST00000477975 159 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 MTCO2P30-201ENST00000503662 364 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 CBX3P8-201ENST00000532412 525 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.86□□□□□ -2.27
CLOCKO15516 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 AP000770.2-201ENST00000623694 100 ntBASIC0.86□□□□□ -2.27
CLOCKO15516 MTND4P12-201ENST00000498999 1377 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 Y_RNA.151-201ENST00000363566 112 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 RNU6-873P-201ENST00000363833 107 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 DEFB108C-201ENST00000400154 252 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.85□□□□□ -2.27
CLOCKO15516 ERLEC1P1-201ENST00000433806 578 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 TPT1P7-201ENST00000458300 517 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 RN7SKP49-201ENST00000516675 260 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 AC027288.2-201ENST00000553028 243 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.85□□□□□ -2.27
CLOCKO15516 MIR151B-201ENST00000584249 96 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 MIR6863-201ENST00000636112 90 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 MIR3974-201ENST00000637126 96 ntBASIC0.85□□□□□ -2.27
CLOCKO15516 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 SNORD12-201ENST00000391002 90 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 MIR548J-201ENST00000408833 112 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.84□□□□□ -2.27
CLOCKO15516 POLR3GP2-201ENST00000588366 668 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CLOCKO15516 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 SNORA28-201ENST00000606769 126 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 AL158209.2-201ENST00000619266 216 ntBASIC0.84□□□□□ -2.27
CLOCKO15516 AC018630.2-201ENST00000534866 2403 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 RNU6-199P-201ENST00000362954 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms