Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 Y_RNA.445-201ENST00000384168 102 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SMAD9O15198 AC018865.2-201ENST00000423631 129 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 CHEK2P4-201ENST00000450340 246 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 NDUFB4P10-201ENST00000452541 359 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 Y_RNA.639-201ENST00000458981 102 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 RNU6-1041P-201ENST00000516254 102 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.95□□□□□ -2.1
SMAD9O15198 AL442163.3-201ENST00000554110 156 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 DEFB122-202ENST00000569013 197 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 AC005034.5-201ENST00000604219 466 ntBASIC1.95□□□□□ -2.1
SMAD9O15198 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.95□□□□□ -2.1
SMAD9O15198 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.94□□□□□ -2.1
SMAD9O15198 AC009487.4-201ENST00000624969 3585 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 Y_RNA.112-201ENST00000363250 102 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 Y_RNA.395-201ENST00000383945 109 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 RNU6-926P-201ENST00000384075 107 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 Y_RNA.498-201ENST00000384460 102 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 RNU6-308P-201ENST00000390957 107 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.94□□□□□ -2.1
SMAD9O15198 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AL591806.2-201ENST00000433122 173 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 MTND2P29-201ENST00000438595 412 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AL353689.1-201ENST00000438895 199 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AL137792.2-201ENST00000443484 235 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AC007677.1-201ENST00000445757 515 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
SMAD9O15198 ATP5J2P3-201ENST00000451550 258 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 snoU13.23-201ENST00000458863 104 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AC074133.1-201ENST00000515696 183 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 SNORA40.9-201ENST00000515895 93 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 RNU6-911P-201ENST00000516523 104 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AC018448.1-201ENST00000552843 316 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AC015712.3-201ENST00000559380 164 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 AC005786.1-201ENST00000588553 154 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.94□□□□□ -2.1
SMAD9O15198 Y_RNA.394-201ENST00000383942 103 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 RNY1P14-201ENST00000384426 108 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 RNY3P4-201ENST00000384428 101 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 MIR1185-2-201ENST00000408687 86 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 RNA5SP501-201ENST00000410990 112 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 MTCO3P19-201ENST00000415864 321 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 AC008134.1-201ENST00000420943 193 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 MTCO2P12-201ENST00000427426 682 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.93□□□□□ -2.1
SMAD9O15198 RNU6-625P-201ENST00000459412 107 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 RNU6-221P-201ENST00000459541 99 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 AC011406.1-201ENST00000512440 370 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 RNU4-77P-201ENST00000516692 156 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
SMAD9O15198 HSBP1P1-201ENST00000555205 166 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 AL138825.1-201ENST00000618587 192 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 U1.36-201ENST00000620684 176 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 AL606534.2-204ENST00000635008 178 ntBASIC1.93□□□□□ -2.1
SMAD9O15198 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SMAD9O15198 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SMAD9O15198 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SMAD9O15198 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMAD9O15198 RNU6-1264P-201ENST00000383891 107 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 SNORD78.2-201ENST00000391076 69 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 SNORA48.3-201ENST00000391081 134 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 MIR1253-201ENST00000408273 105 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 ELOCP21-201ENST00000412558 336 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 TOMM22P2-201ENST00000430735 237 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 AC023442.1-201ENST00000531247 422 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.92□□□□□ -2.1
SMAD9O15198 AC007485.1-201ENST00000616755 206 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
SMAD9O15198 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
SMAD9O15198 Y_RNA.11-201ENST00000362375 109 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 Y_RNA.27-201ENST00000362540 103 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 Y_RNA.31-201ENST00000362574 102 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RNU6-1266P-201ENST00000362794 105 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RNU6-862P-201ENST00000362804 105 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 Y_RNA.80-201ENST00000362996 102 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RNU6-708P-201ENST00000384217 107 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 Y_RNA.485-201ENST00000384395 102 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 AL160004.2-201ENST00000432935 350 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.91□□□□□ -2.1
SMAD9O15198 Y_RNA.631-201ENST00000459607 101 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 RN7SKP295-201ENST00000517264 153 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 AC025647.1-201ENST00000517879 253 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.91□□□□□ -2.1
SMAD9O15198 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms