Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR4804-201ENST00000581683 73 ntBASIC-0.79□□□□□ -2.54
CHD1O14646 AC104458.1-201ENST00000608243 463 ntBASIC-0.79□□□□□ -2.54
CHD1O14646 RNU6-853P-201ENST00000364306 107 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.8□□□□□ -2.54
CHD1O14646 AC090960.1-201ENST00000421072 306 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
CHD1O14646 RNU2-10P-201ENST00000516375 211 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.8□□□□□ -2.54
CHD1O14646 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.8□□□□□ -2.54
CHD1O14646 AC090186.1-201ENST00000605991 572 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 AP002360.4-201ENST00000606980 481 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 AL136221.1-201ENST00000621449 509 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 MTND4P4-201ENST00000439033 1366 ntBASIC-0.8□□□□□ -2.54
CHD1O14646 AP000568.1-201ENST00000282964 442 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 RNU6-371P-201ENST00000364283 108 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 MIR549A-201ENST00000385268 96 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 MIR320C1-201ENST00000408566 88 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 AC016632.1-201ENST00000503994 196 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 MIR378F-201ENST00000578143 78 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 RBM11P1-201ENST00000604951 799 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 RNU4-84P-201ENST00000364200 139 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 RNU6-284P-201ENST00000411105 106 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 AC069271.1-201ENST00000445577 156 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 AC091021.1-201ENST00000468051 388 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 ADI1P3-201ENST00000549509 470 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 AC138869.1-201ENST00000568623 124 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 Z99497.2-201ENST00000603634 310 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 MIR3666-201ENST00000607845 111 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 MIR6738-201ENST00000619620 64 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 AC131159.1-201ENST00000621854 213 ntBASIC-0.81□□□□□ -2.54
CHD1O14646 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.82□□□□□ -2.54
CHD1O14646 AC074290.1-201ENST00000448883 135 ntBASIC-0.82□□□□□ -2.54
CHD1O14646 AC010468.3-201ENST00000508225 458 ntBASIC-0.82□□□□□ -2.54
CHD1O14646 AC104383.1-201ENST00000530297 370 ntBASIC-0.82□□□□□ -2.54
CHD1O14646 Z99289.3-201ENST00000605586 594 ntBASIC-0.82□□□□□ -2.54
CHD1O14646 AC007684.1-201ENST00000609671 477 ntBASIC-0.82□□□□□ -2.54
CHD1O14646 RNU6-369P-201ENST00000362515 102 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 SNORA72.1-201ENST00000363485 129 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 SNORA12.1-201ENST00000390873 148 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 AL133396.1-201ENST00000432048 687 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 AC079395.1-201ENST00000510981 262 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 AC010376.1-201ENST00000522101 334 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 AL158042.1-201ENST00000605338 460 ntBASIC-0.83□□□□□ -2.54
CHD1O14646 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.83□□□□□ -2.54
CHD1O14646 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
CHD1O14646 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 AL049545.1-201ENST00000401856 572 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 AL136310.1-201ENST00000404926 654 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 AL158050.1-201ENST00000416077 457 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 ZNF885P-201ENST00000420174 1098 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.84□□□□□ -2.54
CHD1O14646 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.84□□□□□ -2.54
CHD1O14646 RNU6-150P-201ENST00000516237 95 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 AC104072.1-201ENST00000568817 668 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 MIR4441-201ENST00000582623 100 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 MIR5006-201ENST00000583027 110 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 MTATP6P2-201ENST00000603319 678 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
CHD1O14646 ELOCP17-201ENST00000414751 326 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.84□□□□□ -2.54
CHD1O14646 MRPS10P2-201ENST00000431226 381 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
CHD1O14646 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.84□□□□□ -2.54
CHD1O14646 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.84□□□□□ -2.54
CHD1O14646 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.84□□□□□ -2.54
CHD1O14646 AL117336.2-201ENST00000602435 335 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 U6.73-201ENST00000619194 103 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.84□□□□□ -2.54
CHD1O14646 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.84□□□□□ -2.54
CHD1O14646 RNA5SP192-201ENST00000364404 120 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 RNA5SP117-201ENST00000365294 118 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 SNORD100-201ENST00000408573 76 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 ELOCP21-201ENST00000412558 336 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 AC006366.1-201ENST00000422002 759 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 AC008628.2-201ENST00000502605 298 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 MIR4263-201ENST00000584745 83 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 AL670379.3-201ENST00000605040 251 ntBASIC-0.85□□□□□ -2.55
CHD1O14646 RNU6-396P-201ENST00000365369 105 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 RNU6-692P-201ENST00000384496 107 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 MIR1285-2-201ENST00000408311 88 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC005002.2-201ENST00000438228 269 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC098679.4-201ENST00000624241 654 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AL162726.3-218ENST00000636401 95 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 RNY3P13-201ENST00000365542 102 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.86□□□□□ -2.55
CHD1O14646 AC007215.1-201ENST00000464893 276 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC010486.2-201ENST00000505572 483 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC090897.1-201ENST00000580909 226 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 DEFB131E-202ENST00000602581 683 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC068792.1-201ENST00000621354 417 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 AC093875.1-201ENST00000623688 504 ntBASIC-0.86□□□□□ -2.55
CHD1O14646 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms