Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.5□□□□□ -2.17
CUX2O14529 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC007215.1-201ENST00000464893 276 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC087477.1-201ENST00000465747 340 ntBASIC1.5□□□□□ -2.17
CUX2O14529 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.5□□□□□ -2.17
CUX2O14529 MIR1321-201ENST00000637766 79 ntBASIC1.5□□□□□ -2.17
CUX2O14529 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.5□□□□□ -2.17
CUX2O14529 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CUX2O14529 RNU6-1305P-201ENST00000364353 104 ntBASIC1.5□□□□□ -2.17
CUX2O14529 MIR514A2-201ENST00000385131 88 ntBASIC1.5□□□□□ -2.17
CUX2O14529 MIR514A3-201ENST00000385132 88 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.5□□□□□ -2.17
CUX2O14529 AC060773.1-201ENST00000421698 310 ntBASIC1.5□□□□□ -2.17
CUX2O14529 HSPE1P9-201ENST00000440046 311 ntBASIC1.5□□□□□ -2.17
CUX2O14529 NFU1P2-201ENST00000448700 469 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC114982.1-201ENST00000469402 321 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC027575.1-201ENST00000481064 460 ntBASIC1.5□□□□□ -2.17
CUX2O14529 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC025465.3-201ENST00000510570 311 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC011406.1-201ENST00000512440 370 ntBASIC1.5□□□□□ -2.17
CUX2O14529 RNA5SP54-201ENST00000516951 92 ntBASIC1.5□□□□□ -2.17
CUX2O14529 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.5□□□□□ -2.17
CUX2O14529 AC006504.8-201ENST00000621046 635 ntBASIC1.5□□□□□ -2.17
CUX2O14529 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.5□□□□□ -2.17
CUX2O14529 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
CUX2O14529 Y_RNA.38-201ENST00000362617 102 ntBASIC1.49□□□□□ -2.17
CUX2O14529 Y_RNA.67-201ENST00000362870 100 ntBASIC1.49□□□□□ -2.17
CUX2O14529 RNU6-1252P-201ENST00000363054 104 ntBASIC1.49□□□□□ -2.17
CUX2O14529 MIR549A-201ENST00000385268 96 ntBASIC1.49□□□□□ -2.17
CUX2O14529 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CUX2O14529 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CUX2O14529 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
CUX2O14529 DLGAP5P1-201ENST00000430307 464 ntBASIC1.49□□□□□ -2.17
CUX2O14529 AC099677.2-201ENST00000436385 175 ntBASIC1.49□□□□□ -2.17
CUX2O14529 UBE2V1P8-201ENST00000437166 265 ntBASIC1.49□□□□□ -2.17
CUX2O14529 AC074290.1-201ENST00000448883 135 ntBASIC1.49□□□□□ -2.17
CUX2O14529 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.49□□□□□ -2.17
CUX2O14529 snoU13.30-201ENST00000458951 104 ntBASIC1.49□□□□□ -2.17
CUX2O14529 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.49□□□□□ -2.17
CUX2O14529 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.49□□□□□ -2.17
CUX2O14529 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.49□□□□□ -2.17
CUX2O14529 RNU6-1146P-201ENST00000516282 102 ntBASIC1.49□□□□□ -2.17
CUX2O14529 SNORA59B-202ENST00000578183 701 ntBASIC1.49□□□□□ -2.17
CUX2O14529 POLR3GP2-201ENST00000588366 668 ntBASIC1.49□□□□□ -2.17
CUX2O14529 AC092954.2-201ENST00000609103 430 ntBASIC1.49□□□□□ -2.17
CUX2O14529 AC099654.12-201ENST00000639868 649 ntBASIC1.49□□□□□ -2.17
CUX2O14529 MTND4P5-201ENST00000435821 1374 ntBASIC1.48□□□□□ -2.17
CUX2O14529 BX322639.1-202ENST00000423987 2213 ntBASIC1.48□□□□□ -2.17
CUX2O14529 RNU6-296P-201ENST00000384608 107 ntBASIC1.48□□□□□ -2.17
CUX2O14529 ZNF885P-201ENST00000420174 1098 ntBASIC1.48□□□□□ -2.17
CUX2O14529 C8orf59P1-201ENST00000429930 303 ntBASIC1.48□□□□□ -2.17
CUX2O14529 MTCO3P29-201ENST00000432119 779 ntBASIC1.48□□□□□ -2.17
CUX2O14529 MTATP6P26-201ENST00000445926 662 ntBASIC1.48□□□□□ -2.17
CUX2O14529 AC016717.1-201ENST00000448918 286 ntBASIC1.48□□□□□ -2.17
CUX2O14529 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.48□□□□□ -2.17
CUX2O14529 RNU7-57P-201ENST00000459540 60 ntBASIC1.48□□□□□ -2.17
CUX2O14529 HMGN1P10-201ENST00000474557 553 ntBASIC1.48□□□□□ -2.17
CUX2O14529 RNU2-34P-201ENST00000516534 121 ntBASIC1.48□□□□□ -2.17
CUX2O14529 AC008269.2-201ENST00000561915 1105 ntBASIC1.48□□□□□ -2.17
CUX2O14529 AC069114.2-201ENST00000604699 304 ntBASIC1.48□□□□□ -2.17
CUX2O14529 AF250324.2-201ENST00000608299 610 ntBASIC1.48□□□□□ -2.17
CUX2O14529 AC019193.3-201ENST00000609144 554 ntBASIC1.48□□□□□ -2.17
CUX2O14529 AL133215.3-201ENST00000609801 448 ntBASIC1.48□□□□□ -2.17
CUX2O14529 ZNF204P-201ENST00000416749 2397 ntBASIC1.48□□□□□ -2.17
CUX2O14529 RNU6-222P-201ENST00000362438 107 ntBASIC1.47□□□□□ -2.17
CUX2O14529 RNU6-975P-201ENST00000384296 105 ntBASIC1.47□□□□□ -2.17
CUX2O14529 RNU6-780P-201ENST00000391030 104 ntBASIC1.47□□□□□ -2.17
CUX2O14529 MIR1253-201ENST00000408273 105 ntBASIC1.47□□□□□ -2.17
CUX2O14529 RPS26P42-201ENST00000413485 326 ntBASIC1.47□□□□□ -2.17
CUX2O14529 MTCO1P20-201ENST00000425366 358 ntBASIC1.47□□□□□ -2.17
CUX2O14529 RNU6-496P-201ENST00000516145 99 ntBASIC1.47□□□□□ -2.17
CUX2O14529 APOOP3-201ENST00000536787 586 ntBASIC1.47□□□□□ -2.17
CUX2O14529 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.47□□□□□ -2.17
CUX2O14529 AC068205.3-201ENST00000636385 468 ntBASIC1.47□□□□□ -2.17
CUX2O14529 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.47□□□□□ -2.17
CUX2O14529 RNU6-522P-201ENST00000364497 107 ntBASIC1.46□□□□□ -2.18
CUX2O14529 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
CUX2O14529 RNU6-541P-201ENST00000384709 110 ntBASIC1.46□□□□□ -2.18
CUX2O14529 RNU6-908P-201ENST00000410160 94 ntBASIC1.46□□□□□ -2.18
CUX2O14529 MTND3P21-201ENST00000433774 331 ntBASIC1.46□□□□□ -2.18
CUX2O14529 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
CUX2O14529 AC009237.7-201ENST00000447357 229 ntBASIC1.46□□□□□ -2.18
CUX2O14529 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.46□□□□□ -2.18
CUX2O14529 RNU7-187P-201ENST00000458985 68 ntBASIC1.46□□□□□ -2.18
CUX2O14529 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.46□□□□□ -2.18
CUX2O14529 RNA5SP481-201ENST00000516814 122 ntBASIC1.46□□□□□ -2.18
CUX2O14529 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.46□□□□□ -2.18
CUX2O14529 Y_RNA.436-201ENST00000384097 102 ntBASIC1.45□□□□□ -2.18
CUX2O14529 Y_RNA.530-201ENST00000384587 101 ntBASIC1.45□□□□□ -2.18
CUX2O14529 MIR32-201ENST00000384965 70 ntBASIC1.45□□□□□ -2.18
CUX2O14529 AC073910.1-201ENST00000445047 438 ntBASIC1.45□□□□□ -2.18
CUX2O14529 TRBVA-201ENST00000498804 316 ntBASIC1.45□□□□□ -2.18
CUX2O14529 MTCO2P30-201ENST00000503662 364 ntBASIC1.45□□□□□ -2.18
CUX2O14529 ACA59.1-201ENST00000515966 143 ntBASIC1.45□□□□□ -2.18
CUX2O14529 DEFB131C-201ENST00000528817 165 ntBASIC1.45□□□□□ -2.18
CUX2O14529 MIR4422-201ENST00000581938 83 ntBASIC1.45□□□□□ -2.18
CUX2O14529 FAM157A-202ENST00000615155 405 ntBASIC1.45□□□□□ -2.18
CUX2O14529 AL391516.1-201ENST00000554380 2449 ntBASIC1.45□□□□□ -2.18
CUX2O14529 RNU6-271P-201ENST00000363858 105 ntBASIC1.44□□□□□ -2.18
CUX2O14529 Y_RNA.402-201ENST00000383972 102 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms