Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-462P-201ENST00000362659 105 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 RNA5SP257-201ENST00000363023 116 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AL049545.1-201ENST00000401856 572 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AC004866.1-201ENST00000411748 78 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 MTND1P4-201ENST00000435196 415 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AC007327.1-201ENST00000447461 264 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AC079354.2-201ENST00000453523 154 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.72□□□□□ -2.52
HMGN4O00479 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.72□□□□□ -2.52
HMGN4O00479 AC103996.1-201ENST00000555468 102 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AC011921.3-201ENST00000605540 361 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AC240442.1-201ENST00000616055 283 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 AL078596.1-201ENST00000624856 447 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 MIR6759-201ENST00000638110 65 ntBASIC-0.72□□□□□ -2.52
HMGN4O00479 ZNF204P-201ENST00000416749 2397 ntBASIC-0.72□□□□□ -2.53
HMGN4O00479 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
HMGN4O00479 AC073343.1-201ENST00000328239 651 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 RNU6-621P-201ENST00000364752 109 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 SNORD14.1-201ENST00000365609 90 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 RNU6-769P-201ENST00000384407 104 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 SNORA8.3-201ENST00000384679 139 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 MIR452-201ENST00000385020 85 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.73□□□□□ -2.53
HMGN4O00479 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 PCNPP5-201ENST00000452246 481 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 RPS29P27-201ENST00000463711 170 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 RNU7-43P-201ENST00000516554 64 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 RNU7-51P-201ENST00000516560 62 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
HMGN4O00479 AC104383.1-201ENST00000530297 370 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 AC023050.3-201ENST00000541142 333 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.73□□□□□ -2.53
HMGN4O00479 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.73□□□□□ -2.53
HMGN4O00479 AC090897.1-201ENST00000580909 226 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 MIR4676-201ENST00000583078 72 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 AC072039.2-201ENST00000608883 439 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 AC108747.1-201ENST00000609508 535 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 AC104260.1-201ENST00000616660 539 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 AC008873.1-201ENST00000625051 138 ntBASIC-0.73□□□□□ -2.53
HMGN4O00479 RNU6-580P-201ENST00000365159 107 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 SNORA67.2-201ENST00000384300 149 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 MIR562-201ENST00000384894 95 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.74□□□□□ -2.53
HMGN4O00479 RPS29P8-201ENST00000445109 171 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 MTCO3P8-201ENST00000453691 755 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.74□□□□□ -2.53
HMGN4O00479 MIR4771-2-201ENST00000577758 74 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 MIR4771-1-201ENST00000582617 74 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 AL596327.1-201ENST00000603629 213 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 MIR499B-201ENST00000636498 73 ntBASIC-0.74□□□□□ -2.53
HMGN4O00479 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.74□□□□□ -2.53
HMGN4O00479 RNU6-161P-201ENST00000363051 106 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AL355143.1-201ENST00000407101 841 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.75□□□□□ -2.53
HMGN4O00479 RPS24P1-201ENST00000438550 371 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.75□□□□□ -2.53
HMGN4O00479 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.75□□□□□ -2.53
HMGN4O00479 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.75□□□□□ -2.53
HMGN4O00479 RNU6-63P-201ENST00000516690 95 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 RNU6-58P-201ENST00000517143 103 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 MTND2P38-201ENST00000522536 667 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AP001180.6-201ENST00000584918 159 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AP001836.1-201ENST00000604675 523 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AC012467.1-201ENST00000607740 256 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AC245297.2-201ENST00000610119 565 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 AL591926.4-201ENST00000616895 298 ntBASIC-0.75□□□□□ -2.53
HMGN4O00479 SNORA72.1-201ENST00000363485 129 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 SNORD115-24-201ENST00000363528 82 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 RNU6-137P-201ENST00000363680 108 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 SNORD75.1-201ENST00000408373 60 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC114491.1-201ENST00000416095 246 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC015818.7-201ENST00000428754 109 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 RPL17P35-201ENST00000432217 549 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC087499.7-201ENST00000441958 109 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 snoU13.6-201ENST00000458785 104 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC091021.1-201ENST00000468051 388 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.76□□□□□ -2.53
HMGN4O00479 RNA5SP285-201ENST00000516619 119 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AP002004.2-201ENST00000531656 154 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC133485.4-201ENST00000561835 220 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC012433.1-201ENST00000588916 398 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC246785.4-201ENST00000605374 287 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC091965.4-201ENST00000607691 587 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 Pinc.1-201ENST00000616452 154 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC078880.5-201ENST00000617845 421 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 AC027279.3-201ENST00000625055 122 ntBASIC-0.76□□□□□ -2.53
HMGN4O00479 MIR377-201ENST00000362145 69 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 SNORA1B-201ENST00000362535 133 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 RNU6-674P-201ENST00000363831 107 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 RNU6-652P-201ENST00000365488 107 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 RNU6-187P-201ENST00000384139 106 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 RNA5SP163-201ENST00000410304 99 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 RNA5SP451-201ENST00000410588 110 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AL117351.1-201ENST00000438864 766 ntBASIC-0.77□□□□□ -2.53
HMGN4O00479 AC007215.1-201ENST00000464893 276 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms