Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC080078.2-201ENST00000603766 501 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC087752.4-201ENST00000605911 462 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC092807.2-201ENST00000609367 243 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC007684.1-201ENST00000609671 477 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC017083.3-201ENST00000609955 700 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC008163.1-202ENST00000636004 2889 ntBASIC0.69□□□□□ -2.3
DFFAO00273 RNU6-1266P-201ENST00000362794 105 ntBASIC0.68□□□□□ -2.3
DFFAO00273 SNORD87-201ENST00000364849 89 ntBASIC0.68□□□□□ -2.3
DFFAO00273 AF228730.1-201ENST00000397972 663 ntBASIC0.68□□□□□ -2.3
DFFAO00273 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
DFFAO00273 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.68□□□□□ -2.3
DFFAO00273 STAG3L5P-204ENST00000443759 179 ntBASIC0.68□□□□□ -2.3
DFFAO00273 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.68□□□□□ -2.3
DFFAO00273 RNU6-1208P-201ENST00000459588 107 ntBASIC0.68□□□□□ -2.3
DFFAO00273 AC016957.1-201ENST00000534895 309 ntBASIC0.68□□□□□ -2.3
DFFAO00273 AK6P2-201ENST00000549020 471 ntBASIC0.68□□□□□ -2.3
DFFAO00273 AC090049.2-201ENST00000550377 109 ntBASIC0.68□□□□□ -2.3
DFFAO00273 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.68□□□□□ -2.3
DFFAO00273 AL133215.3-201ENST00000609801 448 ntBASIC0.68□□□□□ -2.3
DFFAO00273 FAM157A-202ENST00000615155 405 ntBASIC0.68□□□□□ -2.3
DFFAO00273 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.68□□□□□ -2.3
DFFAO00273 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
DFFAO00273 SNORD50.1-201ENST00000362987 71 ntBASIC0.67□□□□□ -2.3
DFFAO00273 Y_RNA.167-201ENST00000363735 109 ntBASIC0.67□□□□□ -2.3
DFFAO00273 SNORA75-201ENST00000384158 137 ntBASIC0.67□□□□□ -2.3
DFFAO00273 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
DFFAO00273 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
DFFAO00273 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
DFFAO00273 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
DFFAO00273 EIF4E2P1-201ENST00000393781 255 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AL451046.2-201ENST00000403074 277 ntBASIC0.67□□□□□ -2.3
DFFAO00273 MTCO1P20-201ENST00000425366 358 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.67□□□□□ -2.3
DFFAO00273 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.67□□□□□ -2.3
DFFAO00273 AC079354.2-201ENST00000453523 154 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AC091885.1-201ENST00000506658 268 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AC091133.4-201ENST00000511142 308 ntBASIC0.67□□□□□ -2.3
DFFAO00273 RNU6-917P-201ENST00000516294 104 ntBASIC0.67□□□□□ -2.3
DFFAO00273 RNU6-1332P-201ENST00000516666 104 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AC090142.3-201ENST00000519012 385 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.67□□□□□ -2.3
DFFAO00273 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.67□□□□□ -2.3
DFFAO00273 SNORA28-201ENST00000606769 126 ntBASIC0.67□□□□□ -2.3
DFFAO00273 AC073114.1-201ENST00000612027 490 ntBASIC0.67□□□□□ -2.3
DFFAO00273 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
DFFAO00273 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.67□□□□□ -2.3
DFFAO00273 AC027514.1-201ENST00000588561 1603 ntBASIC0.67□□□□□ -2.3
DFFAO00273 SNORD115-32-201ENST00000364079 82 ntBASIC0.66□□□□□ -2.3
DFFAO00273 Y_RNA.238-201ENST00000364441 102 ntBASIC0.66□□□□□ -2.3
DFFAO00273 Y_RNA.296-201ENST00000364930 108 ntBASIC0.66□□□□□ -2.3
DFFAO00273 RNU6-969P-201ENST00000383900 105 ntBASIC0.66□□□□□ -2.3
DFFAO00273 AL355796.1-201ENST00000406706 323 ntBASIC0.66□□□□□ -2.3
DFFAO00273 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
DFFAO00273 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.66□□□□□ -2.3
DFFAO00273 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.66□□□□□ -2.3
DFFAO00273 RPS3AP17-201ENST00000472594 777 ntBASIC0.66□□□□□ -2.3
DFFAO00273 TRBVA-201ENST00000498804 316 ntBASIC0.66□□□□□ -2.3
DFFAO00273 RNU6-947P-201ENST00000516264 106 ntBASIC0.66□□□□□ -2.3
DFFAO00273 SNORA25.14-201ENST00000516481 132 ntBASIC0.66□□□□□ -2.3
DFFAO00273 Y_RNA.695-201ENST00000516715 107 ntBASIC0.66□□□□□ -2.3
DFFAO00273 RNU6-1198P-201ENST00000516904 67 ntBASIC0.66□□□□□ -2.3
DFFAO00273 RNU4-9P-201ENST00000364951 139 ntBASIC0.65□□□□□ -2.31
DFFAO00273 Y_RNA.415-201ENST00000384012 112 ntBASIC0.65□□□□□ -2.31
DFFAO00273 MIR32-201ENST00000384965 70 ntBASIC0.65□□□□□ -2.31
DFFAO00273 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
DFFAO00273 TPT1P7-201ENST00000458300 517 ntBASIC0.65□□□□□ -2.31
DFFAO00273 RNU6-261P-201ENST00000459506 102 ntBASIC0.65□□□□□ -2.31
DFFAO00273 AC083798.1-201ENST00000472671 131 ntBASIC0.65□□□□□ -2.31
DFFAO00273 RPS26P48-201ENST00000491713 339 ntBASIC0.65□□□□□ -2.31
DFFAO00273 RNU6-322P-201ENST00000516010 103 ntBASIC0.65□□□□□ -2.31
DFFAO00273 RNU6-58P-201ENST00000517143 103 ntBASIC0.65□□□□□ -2.31
DFFAO00273 LRRC34P1-201ENST00000542742 915 ntBASIC0.65□□□□□ -2.31
DFFAO00273 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.65□□□□□ -2.31
DFFAO00273 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.65□□□□□ -2.31
DFFAO00273 AC145350.1-201ENST00000567426 208 ntBASIC0.65□□□□□ -2.31
DFFAO00273 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
DFFAO00273 MIR4760-201ENST00000585040 80 ntBASIC0.65□□□□□ -2.31
DFFAO00273 MIR4438-201ENST00000585271 93 ntBASIC0.65□□□□□ -2.31
DFFAO00273 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
DFFAO00273 AC068790.6-201ENST00000602558 258 ntBASIC0.65□□□□□ -2.31
DFFAO00273 AL357312.1-201ENST00000603879 298 ntBASIC0.65□□□□□ -2.31
DFFAO00273 AP001330.5-201ENST00000607176 411 ntBASIC0.65□□□□□ -2.31
DFFAO00273 AC073534.2-201ENST00000620377 381 ntBASIC0.65□□□□□ -2.31
DFFAO00273 MTND4P12-201ENST00000498999 1377 ntBASIC0.65□□□□□ -2.31
DFFAO00273 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
DFFAO00273 AC121333.1-201ENST00000567488 2709 ntBASIC0.64□□□□□ -2.31
DFFAO00273 SNORD113-7-201ENST00000363762 77 ntBASIC0.64□□□□□ -2.31
DFFAO00273 RNU6-873P-201ENST00000363833 107 ntBASIC0.64□□□□□ -2.31
DFFAO00273 Y_RNA.319-201ENST00000365138 92 ntBASIC0.64□□□□□ -2.31
DFFAO00273 RNU6-424P-201ENST00000384367 105 ntBASIC0.64□□□□□ -2.31
DFFAO00273 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
DFFAO00273 MIR514A2-201ENST00000385131 88 ntBASIC0.64□□□□□ -2.31
DFFAO00273 MIR514A3-201ENST00000385132 88 ntBASIC0.64□□□□□ -2.31
DFFAO00273 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
DFFAO00273 AL590002.1-201ENST00000406554 418 ntBASIC0.64□□□□□ -2.31
DFFAO00273 RNU4-55P-201ENST00000410731 137 ntBASIC0.64□□□□□ -2.31
DFFAO00273 CALM2P4-201ENST00000430810 426 ntBASIC0.64□□□□□ -2.31
DFFAO00273 Z82188.1-201ENST00000436709 154 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms