Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.92□□□□□ -1.78
H3BM21 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
H3BM21 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3BM21 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.92□□□□□ -1.78
H3BM21 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.91□□□□□ -1.78
H3BM21 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
H3BM21 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3BM21 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
H3BM21 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3BM21 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H3BM21 RNA5SP387-201ENST00000364226 106 ntBASIC3.91□□□□□ -1.78
H3BM21 Y_RNA.454-201ENST00000384224 113 ntBASIC3.91□□□□□ -1.78
H3BM21 RN7SKP156-201ENST00000410308 342 ntBASIC3.91□□□□□ -1.78
H3BM21 VDAC1P3-201ENST00000434069 851 ntBASIC3.91□□□□□ -1.78
H3BM21 HMGN2P9-201ENST00000476875 229 ntBASIC3.91□□□□□ -1.78
H3BM21 RN7SL323P-201ENST00000494712 295 ntBASIC3.91□□□□□ -1.78
H3BM21 AC023141.12-201ENST00000512399 199 ntBASIC3.91□□□□□ -1.78
H3BM21 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.91□□□□□ -1.78
H3BM21 MIR4694-201ENST00000578534 80 ntBASIC3.91□□□□□ -1.78
H3BM21 AC091167.4-201ENST00000605079 184 ntBASIC3.91□□□□□ -1.78
H3BM21 AL591424.2-201ENST00000617023 128 ntBASIC3.91□□□□□ -1.78
H3BM21 MIR376A2-201ENST00000636782 80 ntBASIC3.91□□□□□ -1.78
H3BM21 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3BM21 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3BM21 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3BM21 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
H3BM21 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3BM21 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
H3BM21 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
H3BM21 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
H3BM21 Y_RNA.4-201ENST00000362333 112 ntBASIC3.9□□□□□ -1.79
H3BM21 Y_RNA.40-201ENST00000362645 93 ntBASIC3.9□□□□□ -1.79
H3BM21 Y_RNA.96-201ENST00000363092 109 ntBASIC3.9□□□□□ -1.79
H3BM21 RNU6-832P-201ENST00000363319 107 ntBASIC3.9□□□□□ -1.79
H3BM21 RNU6-529P-201ENST00000363383 104 ntBASIC3.9□□□□□ -1.79
H3BM21 RNU6-60P-201ENST00000364792 103 ntBASIC3.9□□□□□ -1.79
H3BM21 RNU6-590P-201ENST00000365039 107 ntBASIC3.9□□□□□ -1.79
H3BM21 RNU6-117P-201ENST00000365415 107 ntBASIC3.9□□□□□ -1.79
H3BM21 SNORD24-201ENST00000383884 75 ntBASIC3.9□□□□□ -1.79
H3BM21 Y_RNA.507-201ENST00000384500 99 ntBASIC3.9□□□□□ -1.79
H3BM21 AC063976.3-201ENST00000426849 329 ntBASIC3.9□□□□□ -1.79
H3BM21 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.9□□□□□ -1.79
H3BM21 NDUFA4P2-201ENST00000489989 244 ntBASIC3.9□□□□□ -1.79
H3BM21 AC113410.1-201ENST00000505029 247 ntBASIC3.9□□□□□ -1.79
H3BM21 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.9□□□□□ -1.79
H3BM21 RNU7-123P-201ENST00000515911 60 ntBASIC3.9□□□□□ -1.79
H3BM21 HSPE1P18-201ENST00000517602 280 ntBASIC3.9□□□□□ -1.79
H3BM21 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.9□□□□□ -1.79
H3BM21 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.9□□□□□ -1.79
H3BM21 JPX_2.1-201ENST00000614161 69 ntBASIC3.9□□□□□ -1.79
H3BM21 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
H3BM21 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.79
H3BM21 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H3BM21 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.9□□□□□ -1.79
H3BM21 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
H3BM21 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3BM21 AC010889.1-201ENST00000566193 2666 ntBASIC3.89□□□□□ -1.79
H3BM21 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
H3BM21 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
H3BM21 RNU6-349P-201ENST00000362402 107 ntBASIC3.89□□□□□ -1.79
H3BM21 RNA5SP399-201ENST00000364003 117 ntBASIC3.89□□□□□ -1.79
H3BM21 RNU6-1229P-201ENST00000364295 107 ntBASIC3.89□□□□□ -1.79
H3BM21 SNORA51.4-201ENST00000364993 124 ntBASIC3.89□□□□□ -1.79
H3BM21 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3BM21 MIR30B-201ENST00000384850 88 ntBASIC3.89□□□□□ -1.79
H3BM21 MIR577-201ENST00000385196 96 ntBASIC3.89□□□□□ -1.79
H3BM21 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.89□□□□□ -1.79
H3BM21 SNORA3.3-201ENST00000408712 125 ntBASIC3.89□□□□□ -1.79
H3BM21 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.89□□□□□ -1.79
H3BM21 RNU6-1282P-201ENST00000516735 96 ntBASIC3.89□□□□□ -1.79
H3BM21 RNU7-6P-201ENST00000516845 62 ntBASIC3.89□□□□□ -1.79
H3BM21 AC021739.1-201ENST00000559631 174 ntBASIC3.89□□□□□ -1.79
H3BM21 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.89□□□□□ -1.79
H3BM21 MIR4777-201ENST00000583710 86 ntBASIC3.89□□□□□ -1.79
H3BM21 MIR5197-201ENST00000583721 112 ntBASIC3.89□□□□□ -1.79
H3BM21 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.89□□□□□ -1.79
H3BM21 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3BM21 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H3BM21 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
H3BM21 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
H3BM21 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.88□□□□□ -1.79
H3BM21 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.88□□□□□ -1.79
H3BM21 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.88□□□□□ -1.79
H3BM21 MAPK10-372ENST00000641954 3413 ntBASIC3.88□□□□□ -1.79
H3BM21 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3BM21 SNORA71.3-201ENST00000362582 128 ntBASIC3.88□□□□□ -1.79
H3BM21 Y_RNA.316-201ENST00000365118 111 ntBASIC3.88□□□□□ -1.79
H3BM21 SNORD14D-201ENST00000384390 87 ntBASIC3.88□□□□□ -1.79
H3BM21 RNY1P4-201ENST00000384595 115 ntBASIC3.88□□□□□ -1.79
H3BM21 MIR449B-201ENST00000384995 97 ntBASIC3.88□□□□□ -1.79
H3BM21 RNU6-1197P-201ENST00000391183 107 ntBASIC3.88□□□□□ -1.79
H3BM21 Y_RNA.607-201ENST00000410597 98 ntBASIC3.88□□□□□ -1.79
H3BM21 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.88□□□□□ -1.79
H3BM21 RPS4XP11-201ENST00000446897 772 ntBASIC3.88□□□□□ -1.79
H3BM21 RPS29P20-201ENST00000489592 171 ntBASIC3.88□□□□□ -1.79
H3BM21 MRPS17P9-201ENST00000511924 393 ntBASIC3.88□□□□□ -1.79
H3BM21 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
H3BM21 MIR3944-201ENST00000581277 108 ntBASIC3.88□□□□□ -1.79
H3BM21 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.88□□□□□ -1.79
H3BM21 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms