Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIR338-201ENST00000636369 67 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6-879P-201ENST00000364328 108 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 RNU6-417P-201ENST00000384712 107 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 RNU2-7P-201ENST00000410794 178 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 EIF1P2-201ENST00000428233 350 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 RPL30P15-201ENST00000457129 321 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 U8.22-201ENST00000459141 133 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.683-201ENST00000516508 93 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 RNU6-264P-201ENST00000517134 104 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 AC022868.1-201ENST00000517767 391 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 FRG2DP-202ENST00000566967 323 ntBASIC1.65□□□□□ -2.15
NPIPA3F8WFD2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 MIR1185-2-201ENST00000408687 86 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1001P-201ENST00000411265 100 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC016909.1-201ENST00000415916 166 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 MTND4P18-201ENST00000447010 465 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 RNU6-221P-201ENST00000459541 99 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC091951.2-201ENST00000500762 203 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1146P-201ENST00000516282 102 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC025647.1-201ENST00000517879 253 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC084364.2-201ENST00000546924 395 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 MTND4LP32-201ENST00000636111 270 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 AC010615.1-201ENST00000594254 1764 ntBASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
NPIPA3F8WFD2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1240P-201ENST00000365155 104 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 RNU6-439P-201ENST00000384188 106 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 RNU6-296P-201ENST00000384608 107 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.595-201ENST00000410403 105 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 CST2P1-201ENST00000425770 87 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 MIR2053-201ENST00000459295 91 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AC022493.2-201ENST00000506122 481 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AC091144.1-201ENST00000519573 138 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 MIR548S-201ENST00000581352 82 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AC125232.2-201ENST00000592457 143 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
NPIPA3F8WFD2 RNA5SP361-201ENST00000362686 118 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 SNORA33-201ENST00000363664 130 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.287-201ENST00000364853 94 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 RNU6-890P-201ENST00000384121 107 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 MIR520A-201ENST00000384862 85 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 MIR329-1-201ENST00000385028 80 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 RNA5SP467-201ENST00000391274 118 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 SNORA75.6-201ENST00000391318 127 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 AL627390.1-201ENST00000396055 340 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 RNA5SP489-201ENST00000410986 109 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 AC008134.1-201ENST00000420943 193 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 MTCO3P10-201ENST00000455912 772 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.653-201ENST00000459091 95 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 RNU6-277P-201ENST00000516272 106 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 MIR1302-1-201ENST00000637932 143 ntBASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.384-201ENST00000383909 102 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 Y_RNA.387-201ENST00000383918 102 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1297P-201ENST00000384415 104 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 RNU6-1156P-201ENST00000410365 100 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 AC114482.1-201ENST00000418010 247 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 AC093019.1-201ENST00000443135 252 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 UBE2V1P7-201ENST00000446395 340 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 UQCRBP2-201ENST00000447827 297 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 RN7SL274P-201ENST00000492268 272 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 HMGN1P13-201ENST00000505795 138 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 RNU6-507P-201ENST00000516045 100 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 RNU6-875P-201ENST00000516488 106 ntBASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.61□□□□□ -2.15
NPIPA3F8WFD2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms