Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.3□□□□□ -2.46
TRAV17A0A0B4J275 AC103996.1-201ENST00000555468 102 ntBASIC-0.3□□□□□ -2.46
TRAV17A0A0B4J275 MIR548AO-201ENST00000579992 96 ntBASIC-0.3□□□□□ -2.46
TRAV17A0A0B4J275 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.3□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-833P-201ENST00000363486 107 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 SNORA2A-201ENST00000383885 135 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 SNORA8.2-201ENST00000384372 139 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 MIR593-201ENST00000384856 100 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AL136310.1-201ENST00000404926 654 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AC137499.1-201ENST00000427602 88 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 RPS24P1-201ENST00000438550 371 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 MTCO2P6-201ENST00000463134 685 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 MTATP6P15-201ENST00000527233 835 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AP001542.1-201ENST00000591314 200 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 AL592221.1-201ENST00000605266 382 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.31□□□□□ -2.46
TRAV17A0A0B4J275 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-929P-201ENST00000384429 107 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 SNORD115.1-201ENST00000391109 76 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 PCNPP3-201ENST00000393579 471 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 MIR1265-201ENST00000408444 86 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 SNORA40.12-201ENST00000516329 111 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 FRG2DP-202ENST00000566967 323 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AC025449.1-201ENST00000603896 529 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AL512506.1-201ENST00000613918 449 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AC139792.3-201ENST00000623525 224 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AL078596.1-201ENST00000624856 447 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 AL445984.1-201ENST00000637834 659 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 MIR6086-201ENST00000638065 55 ntBASIC-0.32□□□□□ -2.46
TRAV17A0A0B4J275 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-137P-201ENST00000363680 108 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-827P-201ENST00000365553 106 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 SNORD116.1-201ENST00000365628 92 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-756P-201ENST00000383997 107 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 SNORA8.3-201ENST00000384679 139 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 MIR644A-201ENST00000385262 94 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 MIR643-201ENST00000385267 97 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 AL590632.1-201ENST00000424289 371 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 HSFY5P-201ENST00000453726 309 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 RNA5SP476-201ENST00000516613 103 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 RNU4-5P-201ENST00000607255 135 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 MIR8076-201ENST00000611401 83 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 AC126544.2-201ENST00000625174 749 ntBASIC-0.33□□□□□ -2.46
TRAV17A0A0B4J275 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 SNORA9.1-201ENST00000362412 131 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 RNA5SP98-201ENST00000363158 137 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-715P-201ENST00000365204 103 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 SNORD115-7-201ENST00000365306 82 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 MIR610-201ENST00000385139 96 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 snoU13.21-201ENST00000459368 105 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 AC010493.1-201ENST00000513479 292 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 RNU6-344P-201ENST00000516635 111 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 SNORA25.17-201ENST00000517184 124 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 RNA5SP454-201ENST00000517231 127 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 AP000907.4-201ENST00000604143 237 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 AP000943.4-201ENST00000622912 357 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 AC098679.4-201ENST00000624241 654 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 ZNF204P-201ENST00000416749 2397 ntBASIC-0.34□□□□□ -2.46
TRAV17A0A0B4J275 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 RNA5SP128-201ENST00000365305 116 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 RNU6-641P-201ENST00000384006 107 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 MIR520C-201ENST00000385005 87 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 RNU6-127P-201ENST00000390897 107 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 RNA5SP482-201ENST00000391269 118 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 MIR548H2-201ENST00000408874 88 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 RNU6-613P-201ENST00000410412 108 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 AC015818.7-201ENST00000428754 109 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 AC087499.7-201ENST00000441958 109 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 AL031274.1-201ENST00000450334 232 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 MIR4645-201ENST00000583158 77 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 MIR6755-201ENST00000619993 66 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 AC068792.1-201ENST00000621354 417 ntBASIC-0.35□□□□□ -2.47
TRAV17A0A0B4J275 MIR1295B-201ENST00000636144 60 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms