Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNA5SP361-201ENST00000362686 118 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 RNU6-1317P-201ENST00000364582 104 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 RNU6-969P-201ENST00000383900 105 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 RNA5SP219-201ENST00000390940 113 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 RNU1-139P-201ENST00000391307 165 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 MTCYBP8-201ENST00000422855 651 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AL365203.2-201ENST00000423444 196 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 RNU7-128P-201ENST00000517247 62 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AC004584.2-201ENST00000570407 410 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AC064836.2-201ENST00000609491 462 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 HULC.1-201ENST00000612720 240 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 AC008873.1-201ENST00000625051 138 ntBASIC0.59□□□□□ -2.31
USH1CQ9Y6N9 ZNF204P-201ENST00000416749 2397 ntBASIC0.59□□□□□ -2.32
USH1CQ9Y6N9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL442644.1-201ENST00000454390 3105 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL390237.1-201ENST00000404226 1415 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AP000568.1-201ENST00000282964 442 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 RNU6-199P-201ENST00000362954 107 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 RNU6-1120P-201ENST00000362988 108 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 MT-TH-201ENST00000387441 69 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL451046.2-201ENST00000403074 277 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 MTATP6P18-201ENST00000417994 673 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL445567.1-201ENST00000439121 144 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AC073415.1-201ENST00000449240 153 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AF186996.7-201ENST00000492781 209 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 SNORA14.1-201ENST00000516113 141 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 RNA5SP480-201ENST00000516840 109 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AC104576.1-201ENST00000524225 88 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 MIR3913-1-201ENST00000577744 102 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 FGF7P1-201ENST00000582820 288 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL162424.1-201ENST00000602325 221 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AC007494.3-201ENST00000624660 743 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 AC005609.4-201ENST00000625071 447 ntBASIC0.58□□□□□ -2.32
USH1CQ9Y6N9 Y_RNA.201-201ENST00000364052 96 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNU4-12P-201ENST00000365233 139 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNU6-1105P-201ENST00000384774 107 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 MIR653-201ENST00000385279 96 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNA5SP504-201ENST00000410676 117 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 STAG3L5P-204ENST00000443759 179 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RPL39P39-201ENST00000455840 151 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNU6-1132P-201ENST00000459214 107 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RPS27P22-201ENST00000478056 241 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 BET1P1-201ENST00000482276 359 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RPS26P48-201ENST00000491713 339 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNU6-344P-201ENST00000516635 111 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 RNA5SP454-201ENST00000517231 127 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 MTND4P7-201ENST00000523876 130 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AC090049.2-201ENST00000550377 109 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 SCOCP1-201ENST00000554676 349 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 uc_338.34-201ENST00000617467 174 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AC137590.2-201ENST00000619709 240 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 FER-210ENST00000628534 558 ntTSL 5 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
USH1CQ9Y6N9 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 SNORD114-26-201ENST00000363543 72 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 RNY3P10-201ENST00000384764 102 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 SNORA26.8-201ENST00000391306 124 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 MTCO3P18-201ENST00000440206 761 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 Y_RNA.670-201ENST00000516255 105 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 RNA5SP255-201ENST00000516370 107 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 AC007834.2-201ENST00000536310 343 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 APOOP3-201ENST00000536787 586 ntBASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.56□□□□□ -2.32
USH1CQ9Y6N9 Z94722.1-201ENST00000604328 474 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms