Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC013412.1-201ENST00000610687 192 ntBASIC2.23□□□□□ -2.05
CLDN16Q9Y5I7 AC240442.1-201ENST00000616055 283 ntBASIC2.23□□□□□ -2.05
CLDN16Q9Y5I7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN16Q9Y5I7 U3.8-201ENST00000363675 217 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 SNORA67.2-201ENST00000384300 149 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 Y_RNA.551-201ENST00000384661 102 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 RNA5SP504-201ENST00000410676 117 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 AC139712.2-201ENST00000424302 339 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 AC016717.1-201ENST00000448918 286 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 RNU6-948P-201ENST00000516374 107 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 SCARNA15.1-201ENST00000516384 125 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 RNU6-764P-201ENST00000516396 105 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 RNU6-1137P-201ENST00000517073 99 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 Y_RNA.715-201ENST00000517082 110 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 AC130454.1-201ENST00000622948 401 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CLDN16Q9Y5I7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.162-201ENST00000363683 102 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 SNORA72.2-201ENST00000365028 127 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 SNORD14D-201ENST00000384390 87 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-1160P-201ENST00000384546 104 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR548B-201ENST00000385247 97 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 SNORA40.19-201ENST00000390846 128 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR1262-201ENST00000408276 93 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 RNA5SP475-201ENST00000410568 110 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 AC113618.1-201ENST00000416747 285 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-397P-201ENST00000516226 104 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 AC233702.2-202ENST00000562547 291 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR4287-201ENST00000579398 78 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 AC008873.1-201ENST00000625051 138 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.21□□□□□ -2.06
CLDN16Q9Y5I7 MIR6073-201ENST00000352083 89 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 SNORA63.7-201ENST00000365579 123 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.380-201ENST00000365663 111 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-975P-201ENST00000384296 105 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 MIR1252-201ENST00000408861 65 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-985P-201ENST00000410182 104 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-57P-201ENST00000411348 103 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 ELOCP21-201ENST00000412558 336 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 DPH3P2-201ENST00000422618 250 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AL118496.2-201ENST00000448300 230 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 RNA5SP137-201ENST00000516833 135 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AC021269.2-201ENST00000532318 330 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AC113195.1-201ENST00000579952 141 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 AL360085.1-201ENST00000604713 532 ntBASIC2.2□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-626P-201ENST00000363354 107 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.152-201ENST00000363578 100 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-160P-201ENST00000384591 107 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 AL079342.1-201ENST00000401460 267 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 MRPL35P1-201ENST00000404272 572 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 RNA5SP181-201ENST00000410246 98 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 RAB28P5-201ENST00000427490 651 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 RPEP5-201ENST00000441137 268 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-327P-201ENST00000516270 127 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 MIR4513-201ENST00000581077 86 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 AC008737.2-201ENST00000599446 118 ntBASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN16Q9Y5I7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 AC008555.8-201ENST00000623602 2168 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-961P-201ENST00000363893 105 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-20P-201ENST00000384106 107 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 AC010531.2-201ENST00000465012 153 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 SNORA40.15-201ENST00000516884 107 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 Y_RNA.720-201ENST00000517166 92 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 RNU2-19P-201ENST00000517288 84 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 AK6P2-201ENST00000549020 471 ntBASIC2.18□□□□□ -2.06
CLDN16Q9Y5I7 AC010205.1-201ENST00000616668 449 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms