Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.489-201ENST00000384410 101 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.581-201ENST00000391017 97 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RNU2-20P-201ENST00000410425 191 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-1203P-201ENST00000410703 110 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RNU4-53P-201ENST00000410828 140 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RPL30P4-201ENST00000429309 333 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 IFNA11P-201ENST00000446352 526 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AC011753.1-201ENST00000451001 220 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 SEPT14P8-201ENST00000508026 178 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RNU1-41P-201ENST00000516161 162 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RNU1-48P-201ENST00000516400 162 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RNU2-44P-201ENST00000516795 194 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 RRN3P3-201ENST00000549207 578 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 MIR4423-201ENST00000580922 80 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AC090616.3-201ENST00000582184 217 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 MIR5006-201ENST00000583027 110 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AL357075.2-201ENST00000614906 189 ntBASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
SSX2IPQ9Y2D8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-961P-201ENST00000363893 105 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.307-201ENST00000365022 117 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-20P-201ENST00000384106 107 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.498-201ENST00000384460 102 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 MIR215-201ENST00000384858 110 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AL033519.2-201ENST00000403958 392 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 RNA5SP425-201ENST00000410336 112 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.597-201ENST00000410463 100 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AC009963.1-201ENST00000417265 157 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AC009237.7-201ENST00000447357 229 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 UBL5P3-201ENST00000475112 231 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 RPS23P5-201ENST00000495419 428 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AC018448.1-201ENST00000552843 316 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AC105245.1-201ENST00000581934 244 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 MIR3199-1-201ENST00000582434 88 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 SNORD113-5-201ENST00000607261 78 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AC011373.1-201ENST00000607270 237 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AC069294.1-201ENST00000608397 350 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SSX2IPQ9Y2D8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 MIR335-201ENST00000362173 94 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.14-201ENST00000362415 103 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-727P-201ENST00000363592 107 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.350-201ENST00000365409 98 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-1310P-201ENST00000384153 107 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.447-201ENST00000384184 113 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 MIR218-1-201ENST00000384999 110 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 SNORA12-201ENST00000391162 147 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.602-201ENST00000410535 92 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.638-201ENST00000459374 113 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-625P-201ENST00000459412 107 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AC080013.2-201ENST00000460866 323 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 RPL39P38-201ENST00000467018 153 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 HMGB3P3-201ENST00000510526 400 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-496P-201ENST00000516145 99 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 AC005176.2-201ENST00000596933 147 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 SNORD11B-201ENST00000607707 90 ntBASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSX2IPQ9Y2D8 MTND5P6-201ENST00000422338 1798 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 RNU4-90P-201ENST00000362773 141 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 Y_RNA.562-201ENST00000384695 113 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 AL359511.1-201ENST00000402970 211 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 MIR1294-201ENST00000408503 142 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 RNU2-38P-201ENST00000410856 79 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 AL356320.1-201ENST00000429616 163 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 AC108059.2-201ENST00000434626 151 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 SRIP1-201ENST00000489235 288 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 RN7SL636P-201ENST00000497504 294 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 SNORA31.11-201ENST00000516528 139 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 RNU6-586P-201ENST00000517265 104 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 DEFB131C-201ENST00000528817 165 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 MIR5694-201ENST00000581190 76 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 MIR5092-201ENST00000583139 88 ntBASIC2.67□□□□□ -1.98
SSX2IPQ9Y2D8 AL713866.2-201ENST00000603579 219 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 334.4 ms