Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 AC007671.2-201ENST00000637344 619 ntBASIC0.17□□□□□ -2.38
ERGIC3Q9Y282 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNU6-227P-201ENST00000362865 103 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNA5SP264-201ENST00000363115 107 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 Y_RNA.118-201ENST00000363300 101 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 SNORD113-6-201ENST00000363345 75 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNU6-1286P-201ENST00000383871 107 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNU6-342P-201ENST00000384521 104 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNA5SP504-201ENST00000410676 117 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNA5SP222-201ENST00000411039 105 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 MTCYBP10-201ENST00000424905 650 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 MTCO1P19-201ENST00000443487 500 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 USP9YP29-201ENST00000445112 563 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 SNORD111.1-201ENST00000516421 86 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RNA5SP454-201ENST00000517231 127 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 MTND2P32-201ENST00000521584 1038 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 FRG2DP-202ENST00000566967 323 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 MIR3941-201ENST00000582572 103 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 RN7SL793P-201ENST00000583259 296 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 AC092354.1-201ENST00000606057 376 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 SEPT14P17-201ENST00000617978 177 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 SCARNA4-201ENST00000629045 128 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 AC100810.6-201ENST00000638068 285 ntBASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
ERGIC3Q9Y282 MTND4P9-201ENST00000507819 1346 ntBASIC0.15□□□□□ -2.38
ERGIC3Q9Y282 RNU6-108P-201ENST00000365558 107 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 RNY1P8-201ENST00000383970 114 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 SNORA36.2-201ENST00000384004 127 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 Y_RNA.598-201ENST00000410480 95 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 AL008987.1-201ENST00000415528 237 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 MTCO2P34-201ENST00000421994 607 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 MRPS18CP6-201ENST00000423587 223 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 RNU7-12P-201ENST00000516030 62 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 RNU1-117P-201ENST00000517041 158 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 AP003716.2-201ENST00000528260 108 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 AL117336.2-201ENST00000602435 335 ntBASIC0.15□□□□□ -2.39
ERGIC3Q9Y282 RNU6-1097P-201ENST00000363586 107 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 Y_RNA.393-201ENST00000383936 102 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 SNORD73A-201ENST00000386062 65 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 RNA5SP511-201ENST00000410487 115 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 AL663109.1-201ENST00000411498 844 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 AC098592.1-201ENST00000419352 333 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 AC004854.1-201ENST00000440356 349 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 RNU7-167P-201ENST00000459160 62 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 Y_RNA.673-201ENST00000516306 88 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 MRPS36P4-201ENST00000534436 298 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 AC011712.1-201ENST00000588959 234 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 RMST_3.1-201ENST00000611651 109 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 AC122133.1-201ENST00000613964 233 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 AC007014.2-201ENST00000615581 479 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 MIR7844-201ENST00000616161 122 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 MTND4P4-201ENST00000439033 1366 ntBASIC0.14□□□□□ -2.39
ERGIC3Q9Y282 RNU5F-7P-201ENST00000363696 115 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 Y_RNA.265-201ENST00000364677 108 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 RNU6-1106P-201ENST00000390845 107 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 MIR1185-2-201ENST00000408687 86 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AC093019.1-201ENST00000443135 252 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AL009048.1-201ENST00000450437 298 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 GMFBP1-201ENST00000467831 427 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AC105417.1-201ENST00000514691 285 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 RNU6-430P-201ENST00000517078 107 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 MIR98-201ENST00000606724 119 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
ERGIC3Q9Y282 RNY4P34-201ENST00000364779 95 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 MIR526A1-201ENST00000384897 85 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 MIR320B2-201ENST00000408479 138 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 MTND3P9-201ENST00000429526 346 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 UBE2D3P4-201ENST00000441973 436 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 RNU6-1037P-201ENST00000459571 107 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 AP000870.1-201ENST00000472927 406 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 AF186996.7-201ENST00000492781 209 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 AL136317.1-201ENST00000612653 226 ntBASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.12□□□□□ -2.39
ERGIC3Q9Y282 ZNF204P-201ENST00000416749 2397 ntBASIC0.11□□□□□ -2.39
ERGIC3Q9Y282 MIR103A2-201ENST00000362154 78 ntBASIC0.11□□□□□ -2.39
ERGIC3Q9Y282 MIRLET7C-201ENST00000362160 84 ntBASIC0.11□□□□□ -2.39
ERGIC3Q9Y282 RNY1P4-201ENST00000384595 115 ntBASIC0.11□□□□□ -2.39
ERGIC3Q9Y282 MIR140-201ENST00000385282 100 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms