Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNU6-344P-201ENST00000516635 111 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC026371.1-201ENST00000551867 419 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 TPRKBP2-201ENST00000565969 475 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC004492.1-201ENST00000607036 742 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AL133215.3-201ENST00000609801 448 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC009033.1-201ENST00000624279 431 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC099654.12-201ENST00000639868 649 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDH9Q9ULB4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 RNY3P3-201ENST00000363816 102 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 RNU6-1090P-201ENST00000364065 94 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.554-201ENST00000384672 102 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.615-201ENST00000410769 117 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AC016909.1-201ENST00000415916 166 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 TOMM22P2-201ENST00000430735 237 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH9Q9ULB4 HMGN2P26-201ENST00000463169 339 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 RPS29P25-201ENST00000481709 171 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AC083904.1-201ENST00000487828 231 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AL163195.1-201ENST00000496941 348 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 RNU6-720P-201ENST00000516363 108 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 RNU6-506P-201ENST00000516553 94 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AC010525.2-201ENST00000590920 195 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH9Q9ULB4 MIR1321-201ENST00000637766 79 ntBASIC1.16□□□□□ -2.22
CDH9Q9ULB4 OR4G1P-203ENST00000641984 1631 ntBASIC1.15□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.3-201ENST00000362331 103 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU6-254P-201ENST00000363377 107 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 SNORD113-7-201ENST00000363762 77 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU6-950P-201ENST00000384651 107 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 MIR487A-201ENST00000385009 80 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNA5SP109-201ENST00000391010 116 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RPL21P1-201ENST00000399532 476 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU6-1148P-201ENST00000410992 104 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AC008134.1-201ENST00000420943 193 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU6-221P-201ENST00000459541 99 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU6-1281P-201ENST00000516223 105 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNA5SP54-201ENST00000516951 92 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU1-117P-201ENST00000517041 158 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AC025647.1-201ENST00000517879 253 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AC016957.1-201ENST00000534895 309 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 AC015540.1-201ENST00000615828 501 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.15□□□□□ -2.23
CDH9Q9ULB4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CDH9Q9ULB4 RNU6-245P-201ENST00000384020 107 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 Y_RNA.516-201ENST00000384541 124 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MTND3P21-201ENST00000433774 331 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 ERLEC1P1-201ENST00000433806 578 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH9Q9ULB4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MTND1P5-201ENST00000517906 940 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 AL929325.1-201ENST00000603096 117 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 AL162413.1-201ENST00000603198 110 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MZT1P2-201ENST00000604387 248 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 SNORD11B-201ENST00000607707 90 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 MIR8065-201ENST00000620577 100 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 AL133216.2-202ENST00000634512 349 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 AC024614.3-201ENST00000637860 256 ntBASIC1.14□□□□□ -2.23
CDH9Q9ULB4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
CDH9Q9ULB4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDH9Q9ULB4 RNU6-623P-201ENST00000363143 105 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 RNU6-128P-201ENST00000383976 107 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CDH9Q9ULB4 RPL37P10-201ENST00000412884 288 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 SEPT14P3-201ENST00000439401 183 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 AL732372.2-207ENST00000445840 183 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 SEPT14P2-201ENST00000453405 183 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.13□□□□□ -2.23
CDH9Q9ULB4 SEPT14P4-201ENST00000513445 186 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.13□□□□□ -2.23
CDH9Q9ULB4 RNU1-142P-201ENST00000516682 145 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 FO082796.1-201ENST00000523795 183 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 AC245505.1-201ENST00000556398 224 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 AC021506.2-201ENST00000612354 169 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 AL359075.3-201ENST00000613288 217 ntBASIC1.13□□□□□ -2.23
CDH9Q9ULB4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CDH9Q9ULB4 SNORD50.1-201ENST00000362987 71 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 Y_RNA.135-201ENST00000363439 95 ntBASIC1.12□□□□□ -2.23
CDH9Q9ULB4 SNORD115-8-201ENST00000363856 82 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms