Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-280P-201ENST00000364145 104 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNU6-306P-201ENST00000384617 107 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 JTBP1-201ENST00000441314 247 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNU1-98P-201ENST00000458992 160 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AC005908.1-201ENST00000468701 347 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 TRMT112P2-201ENST00000512910 132 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNU6-566P-201ENST00000516790 107 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNA5SP454-201ENST00000517231 127 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNA5SP437-201ENST00000517249 129 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 AC006001.4-201ENST00000622243 395 ntBASIC1.22□□□□□ -2.21
CLCF1Q9UBD9 RNU6-17P-201ENST00000384245 107 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 RNU6-18P-201ENST00000384527 107 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AC008134.1-201ENST00000420943 193 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AC243428.1-201ENST00000421099 264 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 HMGN2P34-201ENST00000437647 269 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 FO393415.2-201ENST00000480085 343 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AC092989.1-201ENST00000481235 277 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 RNU7-175P-201ENST00000515915 61 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 RNU6-1088P-201ENST00000516850 104 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 RNU1-54P-201ENST00000517181 120 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AC027288.2-201ENST00000553028 243 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 SNORA77B-201ENST00000578179 125 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 MIR4422-201ENST00000581938 83 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.67-201ENST00000362870 100 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RNU6-873P-201ENST00000363833 107 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.490-201ENST00000384413 102 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RNU6-159P-201ENST00000391080 106 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 MIR548F1-201ENST00000408667 84 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RNU6-1148P-201ENST00000410992 104 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 AL139396.1-201ENST00000421137 167 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 MTND1P17-201ENST00000448961 204 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 HSPE1P24-201ENST00000450782 238 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RNU6-221P-201ENST00000459541 99 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 RPL30P10-201ENST00000488148 337 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 AC134698.4-201ENST00000523451 826 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
CLCF1Q9UBD9 ZNF299P-201ENST00000406845 1804 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 MTND5P10-201ENST00000603719 1809 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 RNU6-1240P-201ENST00000365155 104 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 RNU1-78P-201ENST00000391248 165 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 MIR1277-201ENST00000408536 78 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 RNA5SP504-201ENST00000410676 117 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 RPL30P16-201ENST00000419341 429 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 USMG5P1-201ENST00000425964 177 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 NDUFB4P10-201ENST00000452541 359 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 snoU13.27-201ENST00000459278 104 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AC025647.1-201ENST00000517879 253 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AC024995.1-201ENST00000523014 93 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AC100821.1-201ENST00000523153 2479 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AL590705.4-201ENST00000532209 134 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 MIR6128-201ENST00000615528 109 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AC009248.2-201ENST00000619826 254 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 AC073869.6-201ENST00000640656 341 ntBASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CLCF1Q9UBD9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 U3.8-201ENST00000363675 217 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.301-201ENST00000364990 103 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MIR548B-201ENST00000385247 97 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 RNA5SP323-201ENST00000391094 133 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 RNU6-510P-201ENST00000391239 108 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 COX6CP10-201ENST00000416832 224 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 AC073910.1-201ENST00000445047 438 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 RNU4-49P-201ENST00000516080 140 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 RNU6-718P-201ENST00000516166 105 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms