Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNA5SP361-201ENST00000362686 118 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 U8.2-201ENST00000363156 134 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNU6-727P-201ENST00000363592 107 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNU6-450P-201ENST00000364654 107 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 SNORD14.1-201ENST00000365609 90 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 Y_RNA.424-201ENST00000384063 103 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 Y_RNA.455-201ENST00000384230 98 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNU6-823P-201ENST00000391042 103 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 MTND2P29-201ENST00000438595 412 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 MTND5P22-201ENST00000458380 195 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 SNORD53-201ENST00000579969 78 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.37□□□□□ -2.03
LRFN1Q9P244 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 AL590240.4-201ENST00000616908 390 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 MIR7843-201ENST00000622274 79 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 AC064859.1-201ENST00000624741 174 ntBASIC2.37□□□□□ -2.03
LRFN1Q9P244 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LRFN1Q9P244 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 RNU6-23P-201ENST00000363283 107 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 SNORD87-201ENST00000364849 89 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 RNU6-418P-201ENST00000384035 107 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 RNU6-708P-201ENST00000384217 107 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 RNY3P4-201ENST00000384428 101 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.36□□□□□ -2.03
LRFN1Q9P244 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.36□□□□□ -2.03
LRFN1Q9P244 UBL5P3-201ENST00000475112 231 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 SRIP1-201ENST00000489235 288 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 AC074133.1-201ENST00000515696 183 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 Y_RNA.721-201ENST00000517207 102 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 AL442163.3-201ENST00000554110 156 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 AC113195.1-201ENST00000579952 141 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 AC124312.5-201ENST00000604451 268 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.36□□□□□ -2.03
LRFN1Q9P244 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRFN1Q9P244 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 RNU1-138P-201ENST00000384093 164 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LRFN1Q9P244 RNU6-101P-201ENST00000410323 104 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 RNU7-57P-201ENST00000459540 60 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 RN7SL297P-201ENST00000483161 293 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 AC093852.1-201ENST00000503587 266 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 AC040926.1-201ENST00000530195 238 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
LRFN1Q9P244 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LRFN1Q9P244 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.34□□□□□ -2.03
LRFN1Q9P244 Y_RNA.153-201ENST00000363615 91 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 Y_RNA.526-201ENST00000384572 110 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 MIR548B-201ENST00000385247 97 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.34□□□□□ -2.03
LRFN1Q9P244 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.34□□□□□ -2.03
LRFN1Q9P244 AL358176.2-201ENST00000425769 204 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 HMGN2P3-201ENST00000433603 273 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 CR769767.1-201ENST00000436337 346 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 HMGN2P5-201ENST00000436882 273 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 AC016717.1-201ENST00000448918 286 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 PCNPP5-201ENST00000452246 481 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.34□□□□□ -2.03
LRFN1Q9P244 U8.20-201ENST00000459445 131 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 snoU13.26-201ENST00000459452 105 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 RNA5SP320-201ENST00000516263 124 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 AC022616.4-201ENST00000522985 181 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.34□□□□□ -2.03
LRFN1Q9P244 AC007229.1-201ENST00000590455 412 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 AL357075.2-201ENST00000614906 189 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 snoZ196.1-201ENST00000625269 89 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 CTSLP2-204ENST00000629029 392 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
LRFN1Q9P244 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LRFN1Q9P244 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LRFN1Q9P244 Y_RNA.133-201ENST00000363428 110 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 RNU6-1105P-201ENST00000384774 107 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 MIR597-201ENST00000384968 97 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LRFN1Q9P244 RNU11-3P-201ENST00000391111 133 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 ELOCP21-201ENST00000412558 336 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.33□□□□□ -2.04
LRFN1Q9P244 UQCRBP2-201ENST00000447827 297 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 Y_RNA.638-201ENST00000459374 113 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 RNU6-221P-201ENST00000459541 99 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 MTATP8P1-201ENST00000467115 207 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 RNU6-237P-201ENST00000515985 71 ntBASIC2.33□□□□□ -2.04
LRFN1Q9P244 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LRFN1Q9P244 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LRFN1Q9P244 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms